Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.17■□□□□ 0.98
LBX1P52954 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.17■□□□□ 0.98
LBX1P52954 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.17■□□□□ 0.98
LBX1P52954 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.17■□□□□ 0.98
LBX1P52954 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LBX1P52954 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LBX1P52954 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LBX1P52954 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.16■□□□□ 0.98
LBX1P52954 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.16■□□□□ 0.98
LBX1P52954 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.16■□□□□ 0.98
LBX1P52954 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LBX1P52954 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.16■□□□□ 0.98
LBX1P52954 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LBX1P52954 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
LBX1P52954 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LBX1P52954 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LBX1P52954 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.15■□□□□ 0.98
LBX1P52954 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 CEND1P1-201ENST00000451006 455 ntBASIC21.15■□□□□ 0.98
LBX1P52954 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.15■□□□□ 0.98
LBX1P52954 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.15■□□□□ 0.98
LBX1P52954 AC107918.4-202ENST00000641623 219 ntBASIC21.15■□□□□ 0.98
LBX1P52954 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LBX1P52954 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.15■□□□□ 0.98
LBX1P52954 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LBX1P52954 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.14■□□□□ 0.98
LBX1P52954 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
LBX1P52954 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LBX1P52954 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
LBX1P52954 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LBX1P52954 AC002310.6-201ENST00000624451 1377 ntBASIC21.14■□□□□ 0.98
LBX1P52954 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LBX1P52954 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LBX1P52954 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LBX1P52954 AL139400.1-201ENST00000366220 510 ntBASIC21.14■□□□□ 0.97
LBX1P52954 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
LBX1P52954 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.14■□□□□ 0.97
LBX1P52954 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.14■□□□□ 0.97
LBX1P52954 AC005225.4-201ENST00000557330 545 ntBASIC21.14■□□□□ 0.97
LBX1P52954 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.14■□□□□ 0.97
LBX1P52954 AC005498.2-205ENST00000593218 784 ntBASIC21.14■□□□□ 0.97
LBX1P52954 AL078644.1-201ENST00000609881 752 ntBASIC21.14■□□□□ 0.97
LBX1P52954 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
LBX1P52954 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LBX1P52954 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.14■□□□□ 0.97
LBX1P52954 ELL2P1-201ENST00000413990 1906 ntBASIC21.14■□□□□ 0.97
LBX1P52954 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LBX1P52954 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.13■□□□□ 0.97
LBX1P52954 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.13■□□□□ 0.97
LBX1P52954 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.13■□□□□ 0.97
LBX1P52954 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.13■□□□□ 0.97
LBX1P52954 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 AC004449.1-201ENST00000564240 433 ntBASIC21.13■□□□□ 0.97
LBX1P52954 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.13■□□□□ 0.97
LBX1P52954 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.13■□□□□ 0.97
LBX1P52954 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.13■□□□□ 0.97
LBX1P52954 Z92544.3-201ENST00000624747 417 ntBASIC21.13■□□□□ 0.97
LBX1P52954 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.13■□□□□ 0.97
LBX1P52954 AC092865.6-201ENST00000642101 219 ntBASIC21.13■□□□□ 0.97
LBX1P52954 INTS4P1-201ENST00000438455 1935 ntBASIC21.13■□□□□ 0.97
LBX1P52954 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 KRT89P-201ENST00000620027 1478 ntBASIC21.13■□□□□ 0.97
LBX1P52954 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LBX1P52954 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 AC097374.2-201ENST00000618617 1306 ntBASIC21.12■□□□□ 0.97
LBX1P52954 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LBX1P52954 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.12■□□□□ 0.97
LBX1P52954 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms