Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.33■□□□□ 0.21
HCFC1P51610 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.33■□□□□ 0.21
HCFC1P51610 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
HCFC1P51610 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.33■□□□□ 0.21
HCFC1P51610 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.33■□□□□ 0.2
HCFC1P51610 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HCFC1P51610 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.33■□□□□ 0.2
HCFC1P51610 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HCFC1P51610 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.33■□□□□ 0.2
HCFC1P51610 NUS1P1-201ENST00000446295 882 ntBASIC16.33■□□□□ 0.2
HCFC1P51610 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.33■□□□□ 0.2
HCFC1P51610 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.33■□□□□ 0.2
HCFC1P51610 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.33■□□□□ 0.2
HCFC1P51610 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.33■□□□□ 0.2
HCFC1P51610 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HCFC1P51610 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCFC1P51610 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 MRPL3P1-201ENST00000400109 1033 ntBASIC16.32■□□□□ 0.2
HCFC1P51610 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC1P51610 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC1P51610 AC104390.1-201ENST00000555663 520 ntBASIC16.32■□□□□ 0.2
HCFC1P51610 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HCFC1P51610 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.32■□□□□ 0.2
HCFC1P51610 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.32■□□□□ 0.2
HCFC1P51610 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.32■□□□□ 0.2
HCFC1P51610 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.32■□□□□ 0.2
HCFC1P51610 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCFC1P51610 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC1P51610 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC1P51610 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 AP000867.3-201ENST00000524675 377 ntBASIC16.31■□□□□ 0.2
HCFC1P51610 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HCFC1P51610 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC1P51610 AC138894.3-201ENST00000603787 634 ntBASIC16.31■□□□□ 0.2
HCFC1P51610 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC1P51610 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HCFC1P51610 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HCFC1P51610 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1P51610 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1P51610 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1P51610 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 AP002469.2-201ENST00000531724 424 ntBASIC16.31■□□□□ 0.2
HCFC1P51610 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HCFC1P51610 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HCFC1P51610 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1P51610 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1P51610 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 AC112497.1-201ENST00000624824 639 ntBASIC16.3■□□□□ 0.2
HCFC1P51610 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1P51610 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1P51610 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1P51610 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms