Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC011506.1-201ENST00000474329 610 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AC091390.4-202ENST00000476426 537 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AC097488.1-201ENST00000507834 756 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 AP000692.2-201ENST00000608391 879 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AC011298.2-201ENST00000617989 482 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AC130371.2-201ENST00000619443 611 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE6CP51160 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 AC020763.4-201ENST00000623414 4170 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 AL031598.1-201ENST00000561511 1773 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 Z98044.1-201ENST00000632503 1764 ntBASIC20.26■□□□□ 0.83
PDE6CP51160 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6CP51160 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PDE6CP51160 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 AL512353.2-201ENST00000448759 1962 ntBASIC20.25■□□□□ 0.83
PDE6CP51160 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
PDE6CP51160 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 RCN1P1-201ENST00000400413 996 ntBASIC20.25■□□□□ 0.83
PDE6CP51160 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6CP51160 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6CP51160 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 KRT8P9-201ENST00000558927 1449 ntBASIC20.25■□□□□ 0.83
PDE6CP51160 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDE6CP51160 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6CP51160 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDE6CP51160 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDE6CP51160 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6CP51160 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.24■□□□□ 0.83
PDE6CP51160 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.24■□□□□ 0.83
PDE6CP51160 AC010947.1-201ENST00000623454 693 ntBASIC20.24■□□□□ 0.83
PDE6CP51160 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6CP51160 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PDE6CP51160 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6CP51160 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDE6CP51160 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6CP51160 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6CP51160 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDE6CP51160 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.23■□□□□ 0.83
PDE6CP51160 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PDE6CP51160 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6CP51160 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 CRYGFP-201ENST00000418459 633 ntBASIC20.23■□□□□ 0.83
PDE6CP51160 FAM207BP-201ENST00000447172 505 ntBASIC20.23■□□□□ 0.83
PDE6CP51160 AC128688.1-201ENST00000487626 519 ntBASIC20.23■□□□□ 0.83
PDE6CP51160 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6CP51160 EGLN1P1-201ENST00000531623 762 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms