Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA4P48058 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 RNF152P1-201ENST00000397754 604 ntBASIC19.19■□□□□ 0.66
GRIA4P48058 FAM8A6P-201ENST00000407496 1135 ntBASIC19.19■□□□□ 0.66
GRIA4P48058 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA4P48058 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 AC007663.1-201ENST00000438948 1240 ntBASIC19.19■□□□□ 0.66
GRIA4P48058 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.19■□□□□ 0.66
GRIA4P48058 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA4P48058 CKBP1-201ENST00000565489 1086 ntBASIC19.19■□□□□ 0.66
GRIA4P48058 AC091076.1-201ENST00000610741 619 ntBASIC19.19■□□□□ 0.66
GRIA4P48058 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GRIA4P48058 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA4P48058 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GRIA4P48058 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA4P48058 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.19■□□□□ 0.66
GRIA4P48058 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.18■□□□□ 0.66
GRIA4P48058 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.18■□□□□ 0.66
GRIA4P48058 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.18■□□□□ 0.66
GRIA4P48058 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.18■□□□□ 0.66
GRIA4P48058 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GRIA4P48058 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GRIA4P48058 AIRN-201ENST00000601203 4374 ntBASIC19.18■□□□□ 0.66
GRIA4P48058 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GRIA4P48058 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.18■□□□□ 0.66
GRIA4P48058 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
GRIA4P48058 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
GRIA4P48058 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
GRIA4P48058 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA4P48058 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 AC092338.2-201ENST00000568827 1415 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 FP475955.4-201ENST00000623131 1990 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 IRX1P1-201ENST00000438849 1838 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 TSPY17P-201ENST00000450329 467 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 AC139887.4-201ENST00000607877 719 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 MYC-208ENST00000641036 567 ntBASIC19.17■□□□□ 0.66
GRIA4P48058 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GRIA4P48058 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA4P48058 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA4P48058 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
GRIA4P48058 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
GRIA4P48058 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.16■□□□□ 0.66
GRIA4P48058 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.16■□□□□ 0.66
GRIA4P48058 COX11P1-201ENST00000489116 835 ntBASIC19.16■□□□□ 0.66
GRIA4P48058 YBX1P2-201ENST00000489612 999 ntBASIC19.16■□□□□ 0.66
GRIA4P48058 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 AL512604.3-201ENST00000569583 964 ntBASIC19.16■□□□□ 0.66
GRIA4P48058 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.16■□□□□ 0.66
GRIA4P48058 AL023803.3-201ENST00000615559 522 ntBASIC19.16■□□□□ 0.66
GRIA4P48058 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA4P48058 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms