Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.16■□□□□ 0.34
RFC3P40938 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFC3P40938 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC3P40938 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.15■□□□□ 0.34
RFC3P40938 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.15■□□□□ 0.34
RFC3P40938 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC3P40938 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 AC018445.3-201ENST00000624177 1945 ntBASIC17.15■□□□□ 0.34
RFC3P40938 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC3P40938 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFC3P40938 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFC3P40938 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RFC3P40938 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
RFC3P40938 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RFC3P40938 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RFC3P40938 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFC3P40938 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC3P40938 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC3P40938 AP000523.1-201ENST00000398242 1049 ntBASIC17.14■□□□□ 0.33
RFC3P40938 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.14■□□□□ 0.33
RFC3P40938 AC112907.2-201ENST00000448639 330 ntBASIC17.14■□□□□ 0.33
RFC3P40938 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFC3P40938 AC120498.9-201ENST00000339021 3867 ntBASIC17.14■□□□□ 0.33
RFC3P40938 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC3P40938 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFC3P40938 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RFC3P40938 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC3P40938 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC3P40938 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RFC3P40938 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC3P40938 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC3P40938 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC3P40938 BX323043.1-201ENST00000641006 1765 ntBASIC17.13■□□□□ 0.33
RFC3P40938 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 SPDYE15P-201ENST00000424157 909 ntBASIC17.13■□□□□ 0.33
RFC3P40938 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC3P40938 MCCD1P1-208ENST00000445732 328 ntBASIC17.13■□□□□ 0.33
RFC3P40938 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC3P40938 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC3P40938 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 AC024243.1-201ENST00000609234 778 ntBASIC17.13■□□□□ 0.33
RFC3P40938 AC091076.1-201ENST00000610741 619 ntBASIC17.13■□□□□ 0.33
RFC3P40938 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
RFC3P40938 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFC3P40938 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC3P40938 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFC3P40938 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFC3P40938 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.12■□□□□ 0.33
RFC3P40938 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC3P40938 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms