Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC1P35251 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.77■□□□□ 0.76
RFC1P35251 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFC1P35251 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RFC1P35251 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFC1P35251 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFC1P35251 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFC1P35251 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RFC1P35251 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.76■□□□□ 0.75
RFC1P35251 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 ANO7L1-203ENST00000602586 1720 ntBASIC19.76■□□□□ 0.75
RFC1P35251 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.76■□□□□ 0.75
RFC1P35251 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC1P35251 RBM17P1-201ENST00000453646 1190 ntBASIC19.76■□□□□ 0.75
RFC1P35251 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 AC008622.2-201ENST00000617006 1229 ntBASIC19.76■□□□□ 0.75
RFC1P35251 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 MTMR9LP-203ENST00000426597 1545 ntBASIC19.76■□□□□ 0.75
RFC1P35251 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RFC1P35251 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC1P35251 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFC1P35251 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RFC1P35251 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFC1P35251 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC1P35251 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RFC1P35251 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFC1P35251 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RFC1P35251 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.75■□□□□ 0.75
RFC1P35251 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.75■□□□□ 0.75
RFC1P35251 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC1P35251 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC1P35251 WIZP1-201ENST00000531444 2299 ntBASIC19.75■□□□□ 0.75
RFC1P35251 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC1P35251 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.75■□□□□ 0.75
RFC1P35251 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC1P35251 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC1P35251 AC079598.2-202ENST00000546624 1451 ntBASIC19.74■□□□□ 0.75
RFC1P35251 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RFC1P35251 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFC1P35251 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
RFC1P35251 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC1P35251 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.74■□□□□ 0.75
RFC1P35251 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.74■□□□□ 0.75
RFC1P35251 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC1P35251 MIR4497-201ENST00000583208 89 ntBASIC19.74■□□□□ 0.75
RFC1P35251 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC1P35251 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.74■□□□□ 0.75
RFC1P35251 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.74■□□□□ 0.75
RFC1P35251 AC104581.1-202ENST00000635932 2618 ntBASIC19.74■□□□□ 0.75
RFC1P35251 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC1P35251 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC1P35251 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFC1P35251 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFC1P35251 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.74■□□□□ 0.75
RFC1P35251 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC1P35251 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC1P35251 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC1P35251 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RFC1P35251 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms