Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CD40P25942 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
CD40P25942 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.17■□□□□ 0.18
CD40P25942 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.17■□□□□ 0.18
CD40P25942 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.17■□□□□ 0.18
CD40P25942 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.17■□□□□ 0.18
CD40P25942 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.17■□□□□ 0.18
CD40P25942 RASA4DP-201ENST00000460726 1199 ntBASIC16.17■□□□□ 0.18
CD40P25942 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD40P25942 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD40P25942 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.17■□□□□ 0.18
CD40P25942 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.16■□□□□ 0.18
CD40P25942 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.16■□□□□ 0.18
CD40P25942 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 MIR564-202ENST00000385049 94 ntBASIC16.16■□□□□ 0.18
CD40P25942 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.16■□□□□ 0.18
CD40P25942 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.16■□□□□ 0.18
CD40P25942 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.16■□□□□ 0.18
CD40P25942 FAM86EP-206ENST00000510506 987 ntBASIC16.16■□□□□ 0.18
CD40P25942 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.16■□□□□ 0.18
CD40P25942 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.16■□□□□ 0.18
CD40P25942 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CD40P25942 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.16■□□□□ 0.18
CD40P25942 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CD40P25942 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 KRT8P7-201ENST00000533003 1432 ntBASIC16.16■□□□□ 0.18
CD40P25942 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CD40P25942 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.16■□□□□ 0.18
CD40P25942 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD40P25942 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CD40P25942 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 PCED1CP-201ENST00000419887 785 ntBASIC16.15■□□□□ 0.18
CD40P25942 KRT18P23-201ENST00000435622 1283 ntBASIC16.15■□□□□ 0.18
CD40P25942 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.15■□□□□ 0.18
CD40P25942 SEC1P-202ENST00000473944 940 ntBASIC16.15■□□□□ 0.18
CD40P25942 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.15■□□□□ 0.18
CD40P25942 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.15■□□□□ 0.18
CD40P25942 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.15■□□□□ 0.18
CD40P25942 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.15■□□□□ 0.18
CD40P25942 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 LINC01311-201ENST00000565162 1445 ntBASIC16.15■□□□□ 0.18
CD40P25942 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.15■□□□□ 0.18
CD40P25942 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
CD40P25942 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 HYMAI.1-201ENST00000620949 238 ntBASIC16.15■□□□□ 0.18
CD40P25942 AP000550.4-202ENST00000639755 178 ntBASIC16.15■□□□□ 0.18
CD40P25942 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CD40P25942 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD40P25942 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CD40P25942 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CD40P25942 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CD40P25942 AC005332.7-201ENST00000614046 2005 ntBASIC16.14■□□□□ 0.17
CD40P25942 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CD40P25942 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD40P25942 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.14■□□□□ 0.17
CD40P25942 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.14■□□□□ 0.17
CD40P25942 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms