Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 MTMR9LP-203ENST00000426597 1545 ntBASIC17.44■□□□□ 0.38
TNFRSF1BP20333 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 AC090192.1-201ENST00000517740 490 ntBASIC17.44■□□□□ 0.38
TNFRSF1BP20333 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 AC069544.1-201ENST00000609399 999 ntBASIC17.44■□□□□ 0.38
TNFRSF1BP20333 AC092666.2-201ENST00000613287 246 ntBASIC17.44■□□□□ 0.38
TNFRSF1BP20333 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.44■□□□□ 0.38
TNFRSF1BP20333 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 Z85996.1-201ENST00000494644 937 ntBASIC17.43■□□□□ 0.38
TNFRSF1BP20333 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 RNA5SP413-201ENST00000516373 109 ntBASIC17.43■□□□□ 0.38
TNFRSF1BP20333 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 AL023875.1-201ENST00000640777 796 ntBASIC17.43■□□□□ 0.38
TNFRSF1BP20333 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFRSF1BP20333 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 AP003097.1-201ENST00000530657 1135 ntBASIC17.42■□□□□ 0.38
TNFRSF1BP20333 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNFRSF1BP20333 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms