Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.68■□□□□ 0.74
PDGFRAP16234 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.68■□□□□ 0.74
PDGFRAP16234 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.68■□□□□ 0.74
PDGFRAP16234 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.67■□□□□ 0.74
PDGFRAP16234 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PDGFRAP16234 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PDGFRAP16234 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PDGFRAP16234 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
PDGFRAP16234 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.67■□□□□ 0.74
PDGFRAP16234 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
PDGFRAP16234 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.67■□□□□ 0.74
PDGFRAP16234 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.67■□□□□ 0.74
PDGFRAP16234 AC012306.2-201ENST00000609350 630 ntBASIC19.67■□□□□ 0.74
PDGFRAP16234 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.67■□□□□ 0.74
PDGFRAP16234 AC097493.4-201ENST00000641197 219 ntBASIC19.67■□□□□ 0.74
PDGFRAP16234 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 ANO7L1-203ENST00000602586 1720 ntBASIC19.67■□□□□ 0.74
PDGFRAP16234 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFRAP16234 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 MTMR9LP-203ENST00000426597 1545 ntBASIC19.66■□□□□ 0.74
PDGFRAP16234 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFRAP16234 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.66■□□□□ 0.74
PDGFRAP16234 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFRAP16234 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFRAP16234 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.66■□□□□ 0.74
PDGFRAP16234 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFRAP16234 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
PDGFRAP16234 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFRAP16234 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.66■□□□□ 0.74
PDGFRAP16234 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
PDGFRAP16234 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PDGFRAP16234 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
PDGFRAP16234 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDGFRAP16234 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFRAP16234 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
PDGFRAP16234 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.65■□□□□ 0.74
PDGFRAP16234 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.65■□□□□ 0.74
PDGFRAP16234 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PDGFRAP16234 SLC25A1P2-201ENST00000430693 912 ntBASIC19.65■□□□□ 0.74
PDGFRAP16234 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
PDGFRAP16234 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFRAP16234 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDGFRAP16234 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFRAP16234 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.65■□□□□ 0.74
PDGFRAP16234 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.65■□□□□ 0.74
PDGFRAP16234 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDGFRAP16234 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFRAP16234 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFRAP16234 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDGFRAP16234 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
PDGFRAP16234 AL023284.2-201ENST00000405850 579 ntBASIC19.64■□□□□ 0.73
PDGFRAP16234 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.64■□□□□ 0.73
PDGFRAP16234 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFRAP16234 C2orf69P3-201ENST00000565542 1120 ntBASIC19.64■□□□□ 0.73
PDGFRAP16234 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
PDGFRAP16234 AL023803.3-201ENST00000615559 522 ntBASIC19.64■□□□□ 0.73
PDGFRAP16234 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFRAP16234 GPAT2P1-201ENST00000444924 1672 ntBASIC19.64■□□□□ 0.73
PDGFRAP16234 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.64■□□□□ 0.73
PDGFRAP16234 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDGFRAP16234 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDGFRAP16234 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms