Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 AL157888.1-201ENST00000631930 593 ntBASIC18.97■□□□□ 0.63
HLA-EP13747 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 AL032819.2-201ENST00000624543 2162 ntBASIC18.97■□□□□ 0.63
HLA-EP13747 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 AL109659.2-201ENST00000606809 1674 ntBASIC18.97■□□□□ 0.63
HLA-EP13747 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-EP13747 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-EP13747 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-EP13747 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-EP13747 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-EP13747 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-EP13747 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-EP13747 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-EP13747 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-EP13747 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-EP13747 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 FP475955.4-201ENST00000623131 1990 ntBASIC18.95■□□□□ 0.62
HLA-EP13747 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 KRT18P23-201ENST00000435622 1283 ntBASIC18.95■□□□□ 0.62
HLA-EP13747 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-EP13747 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.95■□□□□ 0.62
HLA-EP13747 AC079602.3-201ENST00000623931 403 ntBASIC18.95■□□□□ 0.62
HLA-EP13747 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HLA-EP13747 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-EP13747 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-EP13747 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 AL645929.1-201ENST00000420084 975 ntBASIC18.94■□□□□ 0.62
HLA-EP13747 HCG4P8-203ENST00000443049 980 ntBASIC18.94■□□□□ 0.62
HLA-EP13747 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 KRT8P32-201ENST00000512863 1461 ntBASIC18.94■□□□□ 0.62
HLA-EP13747 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-EP13747 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-EP13747 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HLA-EP13747 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-EP13747 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-EP13747 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms