Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TPRP12270 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TPRP12270 AC027612.4-201ENST00000605371 583 ntBASIC17.57■□□□□ 0.4
TPRP12270 IGHV3-41-201ENST00000613121 348 ntBASIC17.57■□□□□ 0.4
TPRP12270 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TPRP12270 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TPRP12270 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.56■□□□□ 0.4
TPRP12270 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRP12270 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.56■□□□□ 0.4
TPRP12270 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRP12270 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.56■□□□□ 0.4
TPRP12270 AL078644.1-201ENST00000609881 752 ntBASIC17.56■□□□□ 0.4
TPRP12270 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TPRP12270 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRP12270 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TPRP12270 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.55■□□□□ 0.4
TPRP12270 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.55■□□□□ 0.4
TPRP12270 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.55■□□□□ 0.4
TPRP12270 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 AC233723.2-201ENST00000623798 2106 ntBASIC17.55■□□□□ 0.4
TPRP12270 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.55■□□□□ 0.4
TPRP12270 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TPRP12270 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
TPRP12270 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TPRP12270 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TPRP12270 UNC93B6-202ENST00000528242 690 ntBASIC17.55■□□□□ 0.4
TPRP12270 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
TPRP12270 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.55■□□□□ 0.4
TPRP12270 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TPRP12270 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRP12270 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRP12270 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TPRP12270 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRP12270 TREX1-205ENST00000625293 1783 ntBASIC17.55■□□□□ 0.4
TPRP12270 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 AC022494.1-201ENST00000466044 728 ntBASIC17.54■□□□□ 0.4
TPRP12270 ALG1L5P-201ENST00000482043 771 ntBASIC17.54■□□□□ 0.4
TPRP12270 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRP12270 AC005498.2-205ENST00000593218 784 ntBASIC17.54■□□□□ 0.4
TPRP12270 MTDHP3-201ENST00000594186 672 ntBASIC17.54■□□□□ 0.4
TPRP12270 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRP12270 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRP12270 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.54■□□□□ 0.4
TPRP12270 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRP12270 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TPRP12270 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.54■□□□□ 0.4
TPRP12270 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRP12270 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
TPRP12270 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TPRP12270 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.53■□□□□ 0.4
TPRP12270 RPS2P28-201ENST00000314255 741 ntBASIC17.53■□□□□ 0.4
TPRP12270 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TPRP12270 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.53■□□□□ 0.4
TPRP12270 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRP12270 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.53■□□□□ 0.4
TPRP12270 AC021087.4-201ENST00000563761 564 ntBASIC17.53■□□□□ 0.4
TPRP12270 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.53■□□□□ 0.4
TPRP12270 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms