Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TSPY17P-201ENST00000450329 467 ntBASIC14.87□□□□□ -0.03
PF4V1P10720 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 AC006011.2-201ENST00000621313 1158 ntBASIC14.87□□□□□ -0.03
PF4V1P10720 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.87□□□□□ -0.03
PF4V1P10720 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.87□□□□□ -0.03
PF4V1P10720 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PF4V1P10720 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.87□□□□□ -0.03
PF4V1P10720 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.87□□□□□ -0.03
PF4V1P10720 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.87□□□□□ -0.03
PF4V1P10720 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PF4V1P10720 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.87□□□□□ -0.03
PF4V1P10720 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PF4V1P10720 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PF4V1P10720 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.86□□□□□ -0.03
PF4V1P10720 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.86□□□□□ -0.03
PF4V1P10720 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.86□□□□□ -0.03
PF4V1P10720 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
PF4V1P10720 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.86□□□□□ -0.03
PF4V1P10720 AC010653.2-201ENST00000623505 997 ntBASIC14.86□□□□□ -0.03
PF4V1P10720 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 AC141586.3-201ENST00000562166 1838 ntBASIC14.86□□□□□ -0.03
PF4V1P10720 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PF4V1P10720 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PF4V1P10720 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.86□□□□□ -0.03
PF4V1P10720 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.85□□□□□ -0.03
PF4V1P10720 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 INGX-201ENST00000359239 846 ntBASIC14.85□□□□□ -0.03
PF4V1P10720 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.85□□□□□ -0.03
PF4V1P10720 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.85□□□□□ -0.03
PF4V1P10720 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PF4V1P10720 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.85□□□□□ -0.03
PF4V1P10720 AC022616.7-201ENST00000525383 220 ntBASIC14.85□□□□□ -0.03
PF4V1P10720 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms