Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PTBP1P-201ENST00000554374 1601 ntBASIC14.56□□□□□ -0.08
CXCL1P09341 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.56□□□□□ -0.08
CXCL1P09341 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.56□□□□□ -0.08
CXCL1P09341 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.56□□□□□ -0.08
CXCL1P09341 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.56□□□□□ -0.08
CXCL1P09341 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCL1P09341 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCL1P09341 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCL1P09341 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCL1P09341 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCL1P09341 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 AC123595.1-201ENST00000440769 1046 ntBASIC14.55□□□□□ -0.08
CXCL1P09341 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCL1P09341 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCL1P09341 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCL1P09341 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 CYP21A1P-202ENST00000354927 1481 ntBASIC14.55□□□□□ -0.08
CXCL1P09341 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CXCL1P09341 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCL1P09341 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 AC068418.2-201ENST00000577309 3703 ntBASIC14.55□□□□□ -0.08
CXCL1P09341 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCL1P09341 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CXCL1P09341 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCL1P09341 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
CXCL1P09341 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCL1P09341 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.54□□□□□ -0.08
CXCL1P09341 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CXCL1P09341 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 SLC25A6P5-201ENST00000435663 894 ntBASIC14.54□□□□□ -0.08
CXCL1P09341 AL162412.1-201ENST00000567129 965 ntBASIC14.54□□□□□ -0.08
CXCL1P09341 AC131212.1-201ENST00000613771 668 ntBASIC14.54□□□□□ -0.08
CXCL1P09341 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 KRT8P20-201ENST00000423953 1409 ntBASIC14.54□□□□□ -0.08
CXCL1P09341 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL1P09341 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL1P09341 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms