Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHOP08100 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.43■□□□□ 0.7
RHOP08100 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.43■□□□□ 0.7
RHOP08100 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.43■□□□□ 0.7
RHOP08100 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RHOP08100 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOP08100 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOP08100 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.43■□□□□ 0.7
RHOP08100 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RHOP08100 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHOP08100 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
RHOP08100 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOP08100 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
RHOP08100 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOP08100 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.42■□□□□ 0.7
RHOP08100 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 FAAHP1-202ENST00000446499 1238 ntBASIC19.42■□□□□ 0.7
RHOP08100 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOP08100 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.42■□□□□ 0.7
RHOP08100 IFNL4P1-201ENST00000607083 540 ntBASIC19.42■□□□□ 0.7
RHOP08100 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RHOP08100 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RHOP08100 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOP08100 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RHOP08100 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOP08100 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.41■□□□□ 0.7
RHOP08100 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
RHOP08100 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 TSPY19P-201ENST00000418461 509 ntBASIC19.41■□□□□ 0.7
RHOP08100 TSPY18P-201ENST00000441642 509 ntBASIC19.41■□□□□ 0.7
RHOP08100 FDX1P1-201ENST00000449115 551 ntBASIC19.41■□□□□ 0.7
RHOP08100 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 MIR3180-4-201ENST00000582223 153 ntBASIC19.41■□□□□ 0.7
RHOP08100 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 AL390719.2-201ENST00000606993 987 ntBASIC19.41■□□□□ 0.7
RHOP08100 AL732292.2-201ENST00000609649 430 ntBASIC19.41■□□□□ 0.7
RHOP08100 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.41■□□□□ 0.7
RHOP08100 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RHOP08100 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOP08100 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RHOP08100 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
RHOP08100 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 AC141586.3-201ENST00000562166 1838 ntBASIC19.4■□□□□ 0.7
RHOP08100 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.4■□□□□ 0.7
RHOP08100 AC012615.1-201ENST00000565797 1299 ntBASIC19.4■□□□□ 0.7
RHOP08100 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOP08100 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RHOP08100 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 AIRN-201ENST00000601203 4374 ntBASIC19.4■□□□□ 0.7
RHOP08100 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOP08100 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOP08100 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RHOP08100 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms