Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSDP07339 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSDP07339 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.59■□□□□ 0.09
CTSDP07339 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSDP07339 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTSDP07339 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTSDP07339 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTSDP07339 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
CTSDP07339 AC135776.1-201ENST00000319817 2481 ntBASIC15.58■□□□□ 0.09
CTSDP07339 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CTSDP07339 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.58■□□□□ 0.09
CTSDP07339 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTSDP07339 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 AC134043.2-201ENST00000624206 2238 ntBASIC15.58■□□□□ 0.08
CTSDP07339 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.58■□□□□ 0.08
CTSDP07339 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CTSDP07339 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CTSDP07339 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CTSDP07339 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CTSDP07339 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CTSDP07339 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CTSDP07339 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.58■□□□□ 0.08
CTSDP07339 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTSDP07339 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CTSDP07339 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.57■□□□□ 0.08
CTSDP07339 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.57■□□□□ 0.08
CTSDP07339 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTSDP07339 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.57■□□□□ 0.08
CTSDP07339 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 MTMR9LP-203ENST00000426597 1545 ntBASIC15.57■□□□□ 0.08
CTSDP07339 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.57■□□□□ 0.08
CTSDP07339 RCC2P6-201ENST00000526625 1557 ntBASIC15.57■□□□□ 0.08
CTSDP07339 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTSDP07339 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 PRORSD1P-202ENST00000563365 2154 ntBASIC15.56■□□□□ 0.08
CTSDP07339 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.56■□□□□ 0.08
CTSDP07339 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.56■□□□□ 0.08
CTSDP07339 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.56■□□□□ 0.08
CTSDP07339 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.56■□□□□ 0.08
CTSDP07339 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.56■□□□□ 0.08
CTSDP07339 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.56■□□□□ 0.08
CTSDP07339 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.56■□□□□ 0.08
CTSDP07339 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.56■□□□□ 0.08
CTSDP07339 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTSDP07339 AL499627.1-201ENST00000569373 2188 ntBASIC15.56■□□□□ 0.08
CTSDP07339 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CTSDP07339 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTSDP07339 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CTSDP07339 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CTSDP07339 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms