Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.14■□□□□ 0.33
P04436 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
P04436 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P04436 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P04436 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
P04436 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.14■□□□□ 0.33
P04436 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04436 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.13■□□□□ 0.33
P04436 KRT8P32-201ENST00000512863 1461 ntBASIC17.13■□□□□ 0.33
P04436 AC005332.7-201ENST00000614046 2005 ntBASIC17.13■□□□□ 0.33
P04436 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
P04436 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.13■□□□□ 0.33
P04436 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P04436 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.13■□□□□ 0.33
P04436 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.13■□□□□ 0.33
P04436 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.13■□□□□ 0.33
P04436 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.13■□□□□ 0.33
P04436 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
P04436 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
P04436 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.13■□□□□ 0.33
P04436 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
P04436 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04436 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
P04436 AC008556.1-201ENST00000610908 2040 ntBASIC17.13■□□□□ 0.33
P04436 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.12■□□□□ 0.33
P04436 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
P04436 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.12■□□□□ 0.33
P04436 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
P04436 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.12■□□□□ 0.33
P04436 AC034232.1-201ENST00000506026 1064 ntBASIC17.12■□□□□ 0.33
P04436 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.12■□□□□ 0.33
P04436 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.12■□□□□ 0.33
P04436 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
P04436 AC024243.1-201ENST00000609234 778 ntBASIC17.12■□□□□ 0.33
P04436 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
P04436 AC112497.1-201ENST00000624824 639 ntBASIC17.12■□□□□ 0.33
P04436 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P04436 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
P04436 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04436 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
P04436 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
P04436 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.11■□□□□ 0.33
P04436 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.11■□□□□ 0.33
P04436 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
P04436 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.11■□□□□ 0.33
P04436 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P04436 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
P04436 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04436 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P04436 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04436 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 AC116562.4-201ENST00000641316 2276 ntBASIC17.1■□□□□ 0.33
P04436 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
P04436 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
P04436 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.1■□□□□ 0.33
P04436 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms