Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
TUBB4AP04350 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.1■□□□□ 0.81
TUBB4AP04350 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBB4AP04350 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBB4AP04350 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBB4AP04350 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.1■□□□□ 0.81
TUBB4AP04350 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
TUBB4AP04350 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 AD000864.1-201ENST00000624076 2295 ntBASIC20.09■□□□□ 0.81
TUBB4AP04350 AP006587.1-201ENST00000534129 1502 ntBASIC20.09■□□□□ 0.81
TUBB4AP04350 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TUBB4AP04350 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TUBB4AP04350 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.09■□□□□ 0.81
TUBB4AP04350 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBB4AP04350 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBB4AP04350 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TUBB4AP04350 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.09■□□□□ 0.81
TUBB4AP04350 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TUBB4AP04350 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.09■□□□□ 0.81
TUBB4AP04350 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.09■□□□□ 0.81
TUBB4AP04350 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBB4AP04350 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TUBB4AP04350 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.08■□□□□ 0.81
TUBB4AP04350 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TUBB4AP04350 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TUBB4AP04350 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBB4AP04350 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBB4AP04350 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TUBB4AP04350 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.08■□□□□ 0.81
TUBB4AP04350 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TUBB4AP04350 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TUBB4AP04350 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.08■□□□□ 0.8
TUBB4AP04350 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TUBB4AP04350 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.08■□□□□ 0.8
TUBB4AP04350 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.08■□□□□ 0.8
TUBB4AP04350 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBB4AP04350 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TUBB4AP04350 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 AC084018.2-201ENST00000613093 2607 ntBASIC20.07■□□□□ 0.8
TUBB4AP04350 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 MTMR9LP-203ENST00000426597 1545 ntBASIC20.07■□□□□ 0.8
TUBB4AP04350 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TUBB4AP04350 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBB4AP04350 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBB4AP04350 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 AC068338.2-201ENST00000563278 1430 ntBASIC20.07■□□□□ 0.8
TUBB4AP04350 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBB4AP04350 AL499627.1-201ENST00000569373 2188 ntBASIC20.07■□□□□ 0.8
TUBB4AP04350 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBB4AP04350 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBB4AP04350 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBB4AP04350 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBB4AP04350 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TUBB4AP04350 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBB4AP04350 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBB4AP04350 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBB4AP04350 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBB4AP04350 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBB4AP04350 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TUBB4AP04350 AL390719.1-204ENST00000412397 1219 ntBASIC20.06■□□□□ 0.8
TUBB4AP04350 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBB4AP04350 AL355472.2-201ENST00000422958 438 ntBASIC20.06■□□□□ 0.8
TUBB4AP04350 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.06■□□□□ 0.8
TUBB4AP04350 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
TUBB4AP04350 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBB4AP04350 AC069236.1-201ENST00000604339 616 ntBASIC20.06■□□□□ 0.8
TUBB4AP04350 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms