Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A1P02452 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A1P02452 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.58■■□□□ 1.2
COL1A1P02452 KRT17P6-201ENST00000453795 1220 ntBASIC22.58■■□□□ 1.2
COL1A1P02452 BX276092.5-203ENST00000456199 560 ntBASIC22.58■■□□□ 1.2
COL1A1P02452 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.58■■□□□ 1.2
COL1A1P02452 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
COL1A1P02452 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL1A1P02452 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.57■■□□□ 1.2
COL1A1P02452 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 AC034236.2-201ENST00000606662 1610 ntBASIC22.57■■□□□ 1.2
COL1A1P02452 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 AC005332.7-201ENST00000614046 2005 ntBASIC22.57■■□□□ 1.2
COL1A1P02452 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.57■■□□□ 1.2
COL1A1P02452 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.57■■□□□ 1.2
COL1A1P02452 AP002383.4-201ENST00000442518 975 ntBASIC22.57■■□□□ 1.2
COL1A1P02452 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.57■■□□□ 1.2
COL1A1P02452 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.57■■□□□ 1.2
COL1A1P02452 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.57■■□□□ 1.2
COL1A1P02452 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.57■■□□□ 1.2
COL1A1P02452 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
COL1A1P02452 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.57■■□□□ 1.2
COL1A1P02452 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A1P02452 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A1P02452 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A1P02452 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL1A1P02452 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A1P02452 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A1P02452 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A1P02452 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A1P02452 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A1P02452 KRT8P7-201ENST00000533003 1432 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A1P02452 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A1P02452 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL1A1P02452 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.55■■□□□ 1.2
COL1A1P02452 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.55■■□□□ 1.2
COL1A1P02452 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.55■■□□□ 1.2
COL1A1P02452 AC011498.5-201ENST00000592027 486 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.55■■□□□ 1.2
COL1A1P02452 AC116562.4-201ENST00000641316 2276 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A1P02452 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A1P02452 AC016734.2-201ENST00000624325 1377 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 KRT8P10-201ENST00000450021 1447 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 KRT8P50-201ENST00000562022 1438 ntBASIC22.55■■□□□ 1.2
COL1A1P02452 MIR662-201ENST00000384847 95 ntBASIC22.54■■□□□ 1.2
COL1A1P02452 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.54■■□□□ 1.2
COL1A1P02452 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL1A1P02452 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.54■■□□□ 1.2
COL1A1P02452 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms