Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.21■□□□□ 0.67
TOP3BO95985 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.21■□□□□ 0.67
TOP3BO95985 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.21■□□□□ 0.67
TOP3BO95985 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 C2orf69P3-201ENST00000565542 1120 ntBASIC19.21■□□□□ 0.67
TOP3BO95985 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP3BO95985 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TOP3BO95985 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP3BO95985 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP3BO95985 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP3BO95985 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 MESTP1-201ENST00000404287 994 ntBASIC19.2■□□□□ 0.66
TOP3BO95985 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
TOP3BO95985 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.2■□□□□ 0.66
TOP3BO95985 EGLN1P1-201ENST00000531623 762 ntBASIC19.2■□□□□ 0.66
TOP3BO95985 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 FAM87A-204ENST00000613235 858 ntBASIC19.2■□□□□ 0.66
TOP3BO95985 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.2■□□□□ 0.66
TOP3BO95985 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP3BO95985 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP3BO95985 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP3BO95985 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP3BO95985 AC104417.2-201ENST00000562989 1793 ntBASIC19.19■□□□□ 0.66
TOP3BO95985 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP3BO95985 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP3BO95985 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP3BO95985 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
TOP3BO95985 TSPY14P-201ENST00000303979 915 ntBASIC19.19■□□□□ 0.66
TOP3BO95985 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 PCED1CP-201ENST00000419887 785 ntBASIC19.19■□□□□ 0.66
TOP3BO95985 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP3BO95985 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TOP3BO95985 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP3BO95985 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
TOP3BO95985 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.18■□□□□ 0.66
TOP3BO95985 CLEC4GP1-201ENST00000596555 870 ntBASIC19.18■□□□□ 0.66
TOP3BO95985 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TOP3BO95985 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP3BO95985 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.18■□□□□ 0.66
TOP3BO95985 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
TOP3BO95985 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms