Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRUB2O95900 KRT8P32-201ENST00000512863 1461 ntBASIC19.65■□□□□ 0.74
TRUB2O95900 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.65■□□□□ 0.74
TRUB2O95900 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.65■□□□□ 0.74
TRUB2O95900 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB2O95900 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB2O95900 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB2O95900 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB2O95900 WIZP1-201ENST00000531444 2299 ntBASIC19.64■□□□□ 0.74
TRUB2O95900 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB2O95900 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRUB2O95900 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.64■□□□□ 0.73
TRUB2O95900 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.64■□□□□ 0.73
TRUB2O95900 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.64■□□□□ 0.73
TRUB2O95900 MIR4674-201ENST00000582457 87 ntBASIC19.64■□□□□ 0.73
TRUB2O95900 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TRUB2O95900 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.64■□□□□ 0.73
TRUB2O95900 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 GPAT2P1-201ENST00000444924 1672 ntBASIC19.64■□□□□ 0.73
TRUB2O95900 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.64■□□□□ 0.73
TRUB2O95900 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB2O95900 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRUB2O95900 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB2O95900 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRUB2O95900 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB2O95900 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRUB2O95900 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
TRUB2O95900 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB2O95900 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB2O95900 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRUB2O95900 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRUB2O95900 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB2O95900 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB2O95900 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.63■□□□□ 0.73
TRUB2O95900 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.62■□□□□ 0.73
TRUB2O95900 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 MTMR9LP-203ENST00000426597 1545 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRUB2O95900 AL023284.2-201ENST00000405850 579 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 HMGA1P5-201ENST00000412453 271 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 SLC25A3P1-201ENST00000443844 931 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.62■□□□□ 0.73
TRUB2O95900 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.62■□□□□ 0.73
TRUB2O95900 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.62■□□□□ 0.73
TRUB2O95900 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.62■□□□□ 0.73
TRUB2O95900 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.62■□□□□ 0.73
TRUB2O95900 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB2O95900 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.62■□□□□ 0.73
TRUB2O95900 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms