Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.05■□□□□ 0.96
GGPS1O95749 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.05■□□□□ 0.96
GGPS1O95749 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 AL645929.1-201ENST00000420084 975 ntBASIC21.05■□□□□ 0.96
GGPS1O95749 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.05■□□□□ 0.96
GGPS1O95749 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 KRT8P32-201ENST00000512863 1461 ntBASIC21.05■□□□□ 0.96
GGPS1O95749 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GGPS1O95749 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 KRT18P23-201ENST00000435622 1283 ntBASIC21.04■□□□□ 0.96
GGPS1O95749 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.04■□□□□ 0.96
GGPS1O95749 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 AC079602.3-201ENST00000623931 403 ntBASIC21.04■□□□□ 0.96
GGPS1O95749 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 BX323043.1-201ENST00000641006 1765 ntBASIC21.04■□□□□ 0.96
GGPS1O95749 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GGPS1O95749 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.03■□□□□ 0.96
GGPS1O95749 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GGPS1O95749 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GGPS1O95749 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.03■□□□□ 0.96
GGPS1O95749 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.03■□□□□ 0.96
GGPS1O95749 HCG4P8-203ENST00000443049 980 ntBASIC21.03■□□□□ 0.96
GGPS1O95749 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
GGPS1O95749 MIR3917-201ENST00000580971 93 ntBASIC21.03■□□□□ 0.96
GGPS1O95749 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.03■□□□□ 0.96
GGPS1O95749 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GGPS1O95749 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
GGPS1O95749 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
GGPS1O95749 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.03■□□□□ 0.96
GGPS1O95749 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
GGPS1O95749 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.02■□□□□ 0.96
GGPS1O95749 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.02■□□□□ 0.96
GGPS1O95749 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GGPS1O95749 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.02■□□□□ 0.96
GGPS1O95749 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.02■□□□□ 0.96
GGPS1O95749 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GGPS1O95749 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.02■□□□□ 0.96
GGPS1O95749 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.02■□□□□ 0.96
GGPS1O95749 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GGPS1O95749 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GGPS1O95749 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.95
GGPS1O95749 AC116562.4-201ENST00000641316 2276 ntBASIC21.02■□□□□ 0.95
GGPS1O95749 AL032819.2-201ENST00000624543 2162 ntBASIC21.02■□□□□ 0.95
GGPS1O95749 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
GGPS1O95749 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.01■□□□□ 0.95
GGPS1O95749 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.01■□□□□ 0.95
GGPS1O95749 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 MIR564-202ENST00000385049 94 ntBASIC21.01■□□□□ 0.95
GGPS1O95749 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.01■□□□□ 0.95
GGPS1O95749 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.01■□□□□ 0.95
GGPS1O95749 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.01■□□□□ 0.95
GGPS1O95749 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
GGPS1O95749 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.01■□□□□ 0.95
GGPS1O95749 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GGPS1O95749 AC093484.2-201ENST00000580996 2166 ntBASIC21.01■□□□□ 0.95
GGPS1O95749 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.01■□□□□ 0.95
GGPS1O95749 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GGPS1O95749 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GGPS1O95749 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21■□□□□ 0.95
GGPS1O95749 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21■□□□□ 0.95
GGPS1O95749 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21■□□□□ 0.95
GGPS1O95749 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GGPS1O95749 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms