Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM3O75382 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM3O75382 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM3O75382 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM3O75382 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM3O75382 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 TSPY14P-201ENST00000303979 915 ntBASIC17.48■□□□□ 0.39
TRIM3O75382 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
TRIM3O75382 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM3O75382 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 C2orf69P3-201ENST00000565542 1120 ntBASIC17.48■□□□□ 0.39
TRIM3O75382 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM3O75382 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 LINC01568-207ENST00000641790 1380 ntBASIC17.48■□□□□ 0.39
TRIM3O75382 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM3O75382 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM3O75382 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM3O75382 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM3O75382 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM3O75382 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM3O75382 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 LTB4R2-202ENST00000528054 3092 ntBASIC17.47■□□□□ 0.39
TRIM3O75382 SDHAP1-207ENST00000440850 2000 ntBASIC17.47■□□□□ 0.39
TRIM3O75382 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
TRIM3O75382 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM3O75382 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM3O75382 CKBP1-201ENST00000565489 1086 ntBASIC17.47■□□□□ 0.39
TRIM3O75382 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM3O75382 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM3O75382 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM3O75382 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 KRT8P11-201ENST00000409686 1436 ntBASIC17.47■□□□□ 0.39
TRIM3O75382 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM3O75382 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM3O75382 AL032819.2-201ENST00000624543 2162 ntBASIC17.46■□□□□ 0.39
TRIM3O75382 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TRIM3O75382 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 EGLN1P1-201ENST00000531623 762 ntBASIC17.46■□□□□ 0.39
TRIM3O75382 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM3O75382 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM3O75382 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM3O75382 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms