Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
PFDN1O60925 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 AC141586.3-201ENST00000562166 1838 ntBASIC16.82■□□□□ 0.28
PFDN1O60925 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PFDN1O60925 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 AC055733.4-201ENST00000638462 1354 ntBASIC16.81■□□□□ 0.28
PFDN1O60925 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.81■□□□□ 0.28
PFDN1O60925 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 AC005703.6-201ENST00000623265 1329 ntBASIC16.81■□□□□ 0.28
PFDN1O60925 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PFDN1O60925 SLC25A6P5-201ENST00000435663 894 ntBASIC16.81■□□□□ 0.28
PFDN1O60925 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PFDN1O60925 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PFDN1O60925 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.81■□□□□ 0.28
PFDN1O60925 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.8■□□□□ 0.28
PFDN1O60925 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PFDN1O60925 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.8■□□□□ 0.28
PFDN1O60925 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PFDN1O60925 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.8■□□□□ 0.28
PFDN1O60925 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.8■□□□□ 0.28
PFDN1O60925 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PFDN1O60925 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PFDN1O60925 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 AP001094.4-201ENST00000579008 2176 ntBASIC16.79■□□□□ 0.28
PFDN1O60925 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
PFDN1O60925 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PFDN1O60925 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PFDN1O60925 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.79■□□□□ 0.28
PFDN1O60925 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.79■□□□□ 0.28
PFDN1O60925 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.79■□□□□ 0.28
PFDN1O60925 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PFDN1O60925 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN1O60925 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms