Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CTNND1O60716 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.9■■□□□ 1.1
CTNND1O60716 MIR3180-4-201ENST00000582223 153 ntBASIC21.9■■□□□ 1.1
CTNND1O60716 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CTNND1O60716 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.9■■□□□ 1.1
CTNND1O60716 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CTNND1O60716 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.9■■□□□ 1.1
CTNND1O60716 Z83836.1-201ENST00000624605 1642 ntBASIC21.9■■□□□ 1.1
CTNND1O60716 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CTNND1O60716 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTNND1O60716 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CTNND1O60716 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTNND1O60716 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.89■■□□□ 1.1
CTNND1O60716 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.89■■□□□ 1.09
CTNND1O60716 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.89■■□□□ 1.09
CTNND1O60716 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.89■■□□□ 1.09
CTNND1O60716 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.89■■□□□ 1.09
CTNND1O60716 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CTNND1O60716 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.89■■□□□ 1.09
CTNND1O60716 AC005332.3-201ENST00000589904 676 ntBASIC21.89■■□□□ 1.09
CTNND1O60716 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.89■■□□□ 1.09
CTNND1O60716 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.89■■□□□ 1.09
CTNND1O60716 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.89■■□□□ 1.09
CTNND1O60716 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTNND1O60716 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CTNND1O60716 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CTNND1O60716 AC034236.2-201ENST00000606662 1610 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CTNND1O60716 LINC00265-3P-201ENST00000447588 903 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 AP000867.3-201ENST00000524675 377 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 AC012615.1-201ENST00000565797 1299 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 AC090616.6-201ENST00000582640 721 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.88■■□□□ 1.09
CTNND1O60716 IFNL4P1-201ENST00000607083 540 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CTNND1O60716 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CTNND1O60716 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.88■■□□□ 1.09
CTNND1O60716 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 AC125437.2-201ENST00000625180 2167 ntBASIC21.88■■□□□ 1.09
CTNND1O60716 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.88■■□□□ 1.09
CTNND1O60716 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.88■■□□□ 1.09
CTNND1O60716 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.88■■□□□ 1.09
CTNND1O60716 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTNND1O60716 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.87■■□□□ 1.09
CTNND1O60716 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CTNND1O60716 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.87■■□□□ 1.09
CTNND1O60716 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 AP003733.1-201ENST00000491725 852 ntBASIC21.87■■□□□ 1.09
CTNND1O60716 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.87■■□□□ 1.09
CTNND1O60716 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.87■■□□□ 1.09
CTNND1O60716 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.87■■□□□ 1.09
CTNND1O60716 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 IRX1P1-201ENST00000438849 1838 ntBASIC21.87■■□□□ 1.09
CTNND1O60716 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CTNND1O60716 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTNND1O60716 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.86■■□□□ 1.09
CTNND1O60716 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 AC006333.2-201ENST00000607957 2099 ntBASIC21.86■■□□□ 1.09
CTNND1O60716 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CTNND1O60716 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms