Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
PEX1O43933 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.27■□□□□ 0.52
PEX1O43933 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PEX1O43933 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PEX1O43933 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.27■□□□□ 0.52
PEX1O43933 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.27■□□□□ 0.52
PEX1O43933 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.27■□□□□ 0.52
PEX1O43933 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.27■□□□□ 0.52
PEX1O43933 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.27■□□□□ 0.52
PEX1O43933 Z99916.2-201ENST00000604037 246 ntBASIC18.27■□□□□ 0.52
PEX1O43933 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PEX1O43933 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEX1O43933 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PEX1O43933 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.27■□□□□ 0.51
PEX1O43933 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
PEX1O43933 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PEX1O43933 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEX1O43933 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEX1O43933 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.27■□□□□ 0.51
PEX1O43933 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.26■□□□□ 0.51
PEX1O43933 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PEX1O43933 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PEX1O43933 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PEX1O43933 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.26■□□□□ 0.51
PEX1O43933 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.26■□□□□ 0.51
PEX1O43933 AL121829.2-201ENST00000620908 328 ntBASIC18.26■□□□□ 0.51
PEX1O43933 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.26■□□□□ 0.51
PEX1O43933 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
PEX1O43933 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEX1O43933 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PEX1O43933 AC124283.5-201ENST00000624661 1809 ntBASIC18.26■□□□□ 0.51
PEX1O43933 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PEX1O43933 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PEX1O43933 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PEX1O43933 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 KRT16P6-202ENST00000425692 1426 ntBASIC18.25■□□□□ 0.51
PEX1O43933 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PEX1O43933 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 PTBP1P-201ENST00000554374 1601 ntBASIC18.25■□□□□ 0.51
PEX1O43933 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.25■□□□□ 0.51
PEX1O43933 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PEX1O43933 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEX1O43933 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 KRT8P20-201ENST00000423953 1409 ntBASIC18.24■□□□□ 0.51
PEX1O43933 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.24■□□□□ 0.51
PEX1O43933 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.24■□□□□ 0.51
PEX1O43933 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEX1O43933 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.24■□□□□ 0.51
PEX1O43933 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.24■□□□□ 0.51
PEX1O43933 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.24■□□□□ 0.51
PEX1O43933 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms