Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.4■□□□□ 0.54
VEGFDO43915 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 AL357033.4-201ENST00000617703 1807 ntBASIC18.4■□□□□ 0.54
VEGFDO43915 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
VEGFDO43915 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
VEGFDO43915 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.4■□□□□ 0.54
VEGFDO43915 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.4■□□□□ 0.54
VEGFDO43915 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.4■□□□□ 0.54
VEGFDO43915 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.4■□□□□ 0.54
VEGFDO43915 LINC01238-205ENST00000567549 1107 ntBASIC18.4■□□□□ 0.54
VEGFDO43915 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.4■□□□□ 0.54
VEGFDO43915 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
VEGFDO43915 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VEGFDO43915 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.4■□□□□ 0.54
VEGFDO43915 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VEGFDO43915 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
VEGFDO43915 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
VEGFDO43915 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VEGFDO43915 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.39■□□□□ 0.53
VEGFDO43915 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.39■□□□□ 0.53
VEGFDO43915 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VEGFDO43915 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.39■□□□□ 0.53
VEGFDO43915 KRT18P23-201ENST00000435622 1283 ntBASIC18.39■□□□□ 0.53
VEGFDO43915 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.39■□□□□ 0.53
VEGFDO43915 AC063952.2-201ENST00000498792 1227 ntBASIC18.39■□□□□ 0.53
VEGFDO43915 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
VEGFDO43915 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VEGFDO43915 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.39■□□□□ 0.53
VEGFDO43915 Z98044.1-201ENST00000632503 1764 ntBASIC18.39■□□□□ 0.53
VEGFDO43915 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VEGFDO43915 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
VEGFDO43915 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
VEGFDO43915 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 HOMER2P1-201ENST00000455653 964 ntBASIC18.38■□□□□ 0.53
VEGFDO43915 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 AL441883.1-201ENST00000566170 1045 ntBASIC18.38■□□□□ 0.53
VEGFDO43915 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.38■□□□□ 0.53
VEGFDO43915 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VEGFDO43915 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VEGFDO43915 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
VEGFDO43915 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.38■□□□□ 0.53
VEGFDO43915 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.38■□□□□ 0.53
VEGFDO43915 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VEGFDO43915 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VEGFDO43915 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VEGFDO43915 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.37■□□□□ 0.53
VEGFDO43915 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VEGFDO43915 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms