Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.57■■□□□ 1.2
SEMA3EO15041 ATP5G2P1-201ENST00000433580 426 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 PVRIG2P-201ENST00000435460 978 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.57■■□□□ 1.2
SEMA3EO15041 AC011498.5-201ENST00000592027 486 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SEMA3EO15041 AC083906.6-201ENST00000641366 219 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SEMA3EO15041 AL162741.1-201ENST00000565563 1558 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SEMA3EO15041 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SEMA3EO15041 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEMA3EO15041 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.57■■□□□ 1.2
SEMA3EO15041 MTMR9LP-203ENST00000426597 1545 ntBASIC22.57■■□□□ 1.2
SEMA3EO15041 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEMA3EO15041 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.56■■□□□ 1.2
SEMA3EO15041 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 AL161938.1-201ENST00000569833 2180 ntBASIC22.56■■□□□ 1.2
SEMA3EO15041 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.56■■□□□ 1.2
SEMA3EO15041 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.56■■□□□ 1.2
SEMA3EO15041 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 AC093525.10-201ENST00000625130 1569 ntBASIC22.56■■□□□ 1.2
SEMA3EO15041 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SEMA3EO15041 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.56■■□□□ 1.2
SEMA3EO15041 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.56■■□□□ 1.2
SEMA3EO15041 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SEMA3EO15041 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SEMA3EO15041 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.56■■□□□ 1.2
SEMA3EO15041 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.55■■□□□ 1.2
SEMA3EO15041 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 AL357033.4-201ENST00000617703 1807 ntBASIC22.55■■□□□ 1.2
SEMA3EO15041 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.55■■□□□ 1.2
SEMA3EO15041 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.55■■□□□ 1.2
SEMA3EO15041 KRT18P56-201ENST00000507275 550 ntBASIC22.55■■□□□ 1.2
SEMA3EO15041 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.55■■□□□ 1.2
SEMA3EO15041 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.55■■□□□ 1.2
SEMA3EO15041 AC009065.1-201ENST00000564055 1225 ntBASIC22.55■■□□□ 1.2
SEMA3EO15041 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
SEMA3EO15041 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.55■■□□□ 1.2
SEMA3EO15041 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
SEMA3EO15041 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.55■■□□□ 1.2
SEMA3EO15041 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.55■■□□□ 1.2
SEMA3EO15041 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEMA3EO15041 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SEMA3EO15041 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SEMA3EO15041 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SEMA3EO15041 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SEMA3EO15041 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.54■■□□□ 1.2
SEMA3EO15041 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.54■■□□□ 1.2
SEMA3EO15041 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.54■■□□□ 1.2
SEMA3EO15041 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.54■■□□□ 1.2
SEMA3EO15041 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEMA3EO15041 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.53■■□□□ 1.2
SEMA3EO15041 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 AP000593.1-201ENST00000393668 712 ntBASIC22.53■■□□□ 1.2
SEMA3EO15041 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.53■■□□□ 1.2
SEMA3EO15041 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.53■■□□□ 1.2
SEMA3EO15041 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.53■■□□□ 1.2
SEMA3EO15041 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.53■■□□□ 1.2
SEMA3EO15041 NPAP1P7-201ENST00000613027 823 ntBASIC22.53■■□□□ 1.2
SEMA3EO15041 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SEMA3EO15041 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SEMA3EO15041 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SEMA3EO15041 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEMA3EO15041 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.53■■□□□ 1.2
SEMA3EO15041 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.53■■□□□ 1.2
SEMA3EO15041 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
SEMA3EO15041 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEMA3EO15041 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms