Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 HTR7P1-201ENST00000538670 1336 ntBASIC18.22■□□□□ 0.51
UBFD1O14562 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
UBFD1O14562 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBFD1O14562 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.21■□□□□ 0.51
UBFD1O14562 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
UBFD1O14562 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 AC135776.1-201ENST00000319817 2481 ntBASIC18.21■□□□□ 0.51
UBFD1O14562 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBFD1O14562 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.21■□□□□ 0.51
UBFD1O14562 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.21■□□□□ 0.51
UBFD1O14562 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 AL353708.3-201ENST00000610272 989 ntBASIC18.21■□□□□ 0.51
UBFD1O14562 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.21■□□□□ 0.51
UBFD1O14562 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
UBFD1O14562 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBFD1O14562 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.21■□□□□ 0.51
UBFD1O14562 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBFD1O14562 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBFD1O14562 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.21■□□□□ 0.51
UBFD1O14562 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBFD1O14562 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UBFD1O14562 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
UBFD1O14562 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.2■□□□□ 0.5
UBFD1O14562 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBFD1O14562 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBFD1O14562 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 AC006058.3-201ENST00000606217 1069 ntBASIC18.2■□□□□ 0.5
UBFD1O14562 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBFD1O14562 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.2■□□□□ 0.5
UBFD1O14562 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBFD1O14562 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBFD1O14562 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.19■□□□□ 0.5
UBFD1O14562 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.19■□□□□ 0.5
UBFD1O14562 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
UBFD1O14562 KSR1P1-201ENST00000446298 240 ntBASIC18.19■□□□□ 0.5
UBFD1O14562 AP002982.1-201ENST00000492365 877 ntBASIC18.19■□□□□ 0.5
UBFD1O14562 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.19■□□□□ 0.5
UBFD1O14562 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.19■□□□□ 0.5
UBFD1O14562 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
UBFD1O14562 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
UBFD1O14562 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBFD1O14562 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
UBFD1O14562 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.19■□□□□ 0.5
UBFD1O14562 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBFD1O14562 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
UBFD1O14562 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
UBFD1O14562 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.18■□□□□ 0.5
UBFD1O14562 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
UBFD1O14562 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBFD1O14562 AC020763.4-201ENST00000623414 4170 ntBASIC18.18■□□□□ 0.5
UBFD1O14562 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms