Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM238C9JI98 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM238C9JI98 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM238C9JI98 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM238C9JI98 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM238C9JI98 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM238C9JI98 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 AC024257.2-201ENST00000549699 147 ntBASIC13.19□□□□□ -0.3
TMEM238C9JI98 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 AC233992.3-201ENST00000607491 485 ntBASIC13.19□□□□□ -0.3
TMEM238C9JI98 AL136162.1-201ENST00000607711 1078 ntBASIC13.19□□□□□ -0.3
TMEM238C9JI98 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM238C9JI98 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM238C9JI98 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 AC008764.7-201ENST00000593779 1081 ntBASIC13.18□□□□□ -0.3
TMEM238C9JI98 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 FAM21FP-204ENST00000608637 956 ntBASIC13.18□□□□□ -0.3
TMEM238C9JI98 AC131212.1-201ENST00000613771 668 ntBASIC13.18□□□□□ -0.3
TMEM238C9JI98 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM238C9JI98 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM238C9JI98 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms