Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 AL353708.3-201ENST00000610272 989 ntBASIC20.24■□□□□ 0.83
LRRC53A6NM62 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC53A6NM62 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC53A6NM62 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRRC53A6NM62 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC53A6NM62 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LRRC53A6NM62 AP002982.1-201ENST00000492365 877 ntBASIC20.23■□□□□ 0.83
LRRC53A6NM62 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LRRC53A6NM62 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC53A6NM62 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC53A6NM62 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 NOC2LP2-201ENST00000407594 1944 ntBASIC20.22■□□□□ 0.83
LRRC53A6NM62 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 KSR1P1-201ENST00000446298 240 ntBASIC20.22■□□□□ 0.83
LRRC53A6NM62 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC53A6NM62 AL357033.4-201ENST00000617703 1807 ntBASIC20.22■□□□□ 0.83
LRRC53A6NM62 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC53A6NM62 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 AC004951.3-201ENST00000418645 1148 ntBASIC20.21■□□□□ 0.83
LRRC53A6NM62 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 AC128676.1-201ENST00000454392 318 ntBASIC20.21■□□□□ 0.83
LRRC53A6NM62 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC53A6NM62 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC53A6NM62 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms