Protein–RNA interactions for Protein: A6NM43

CCT8L1P, Putative T-complex protein 1 subunit theta-like 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT8L1PA6NM43 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 AC116351.2-201ENST00000606540 1585 ntBASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCT8L1PA6NM43 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 KRT18P11-201ENST00000435214 1283 ntBASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 AC010536.3-201ENST00000620306 533 ntBASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 AC092437.1-201ENST00000624794 1048 ntBASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCT8L1PA6NM43 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.59■□□□□ 0.57
CCT8L1PA6NM43 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.58■□□□□ 0.57
CCT8L1PA6NM43 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCT8L1PA6NM43 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms