Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TVP23AA6NH52 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.77■□□□□ 0.28
TVP23AA6NH52 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.77■□□□□ 0.27
TVP23AA6NH52 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.77■□□□□ 0.27
TVP23AA6NH52 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TVP23AA6NH52 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TVP23AA6NH52 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TVP23AA6NH52 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TVP23AA6NH52 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.76■□□□□ 0.27
TVP23AA6NH52 AC126763.1-201ENST00000552015 2118 ntBASIC16.76■□□□□ 0.27
TVP23AA6NH52 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TVP23AA6NH52 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.76■□□□□ 0.27
TVP23AA6NH52 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TVP23AA6NH52 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.75■□□□□ 0.27
TVP23AA6NH52 RN7SL471P-201ENST00000580476 299 ntBASIC16.75■□□□□ 0.27
TVP23AA6NH52 AC006058.3-201ENST00000606217 1069 ntBASIC16.75■□□□□ 0.27
TVP23AA6NH52 AC110285.5-201ENST00000611501 352 ntBASIC16.75■□□□□ 0.27
TVP23AA6NH52 AC073648.6-201ENST00000641589 218 ntBASIC16.75■□□□□ 0.27
TVP23AA6NH52 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TVP23AA6NH52 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 RCC2P6-201ENST00000526625 1557 ntBASIC16.74■□□□□ 0.27
TVP23AA6NH52 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 KRT8P11-201ENST00000409686 1436 ntBASIC16.74■□□□□ 0.27
TVP23AA6NH52 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 POU5F1P3-201ENST00000428824 1078 ntBASIC16.74■□□□□ 0.27
TVP23AA6NH52 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TVP23AA6NH52 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TVP23AA6NH52 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms