Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 AL391807.1-203ENST00000604392 2365 ntBASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 AL158211.5-201ENST00000623583 2518 ntBASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 HLA-F-220ENST00000434407 884 ntBASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 AL162741.1-201ENST00000565563 1558 ntBASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 NPAP1P7-201ENST00000613027 823 ntBASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D3BA6NDS4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 MIR564-202ENST00000385049 94 ntBASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 AC016734.2-201ENST00000624325 1377 ntBASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D3BA6NDS4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 AC104390.1-201ENST00000555663 520 ntBASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 MIR3652-201ENST00000579335 131 ntBASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 AC012313.10-201ENST00000623509 926 ntBASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D3BA6NDS4 KRT8P32-201ENST00000512863 1461 ntBASIC19.02■□□□□ 0.63
TBC1D3BA6NDS4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.02■□□□□ 0.63
TBC1D3BA6NDS4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 HOXB1-202ENST00000577092 1414 ntBASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 FP475955.4-201ENST00000623131 1990 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms