Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 HLA-A-209ENST00000638375 975 ntBASIC18.77■□□□□ 0.6
CCDC189A1A4V9 AL031598.1-201ENST00000561511 1773 ntBASIC18.77■□□□□ 0.6
CCDC189A1A4V9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CCDC189A1A4V9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 AC083906.6-201ENST00000641366 219 ntBASIC18.76■□□□□ 0.59
CCDC189A1A4V9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC189A1A4V9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 AC069544.1-201ENST00000609399 999 ntBASIC18.75■□□□□ 0.59
CCDC189A1A4V9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC189A1A4V9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 AL355802.2-201ENST00000402069 882 ntBASIC18.74■□□□□ 0.59
CCDC189A1A4V9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC189A1A4V9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 AC009113.1-201ENST00000570267 2443 ntBASIC18.73■□□□□ 0.59
CCDC189A1A4V9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.73■□□□□ 0.59
CCDC189A1A4V9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC189A1A4V9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms