Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC093525.10-201ENST00000625130 1569 ntBASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 FP475955.4-201ENST00000623131 1990 ntBASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF103-CHMP3A0A140T963 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF103-CHMP3A0A140T963 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF103-CHMP3A0A140T963 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF103-CHMP3A0A140T963 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms