Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 FP475955.4-201ENST00000623131 1990 ntBASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 AC009065.1-201ENST00000564055 1225 ntBASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TRAV17A0A0B4J275 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TRAV17A0A0B4J275 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV17A0A0B4J275 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 PVRIG2P-201ENST00000435460 978 ntBASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 NUS1P1-201ENST00000446295 882 ntBASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV17A0A0B4J275 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CLDN5-201ENST00000403084 2357 ntBASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AC141586.3-201ENST00000562166 1838 ntBASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AC125437.2-201ENST00000625180 2167 ntBASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AP003733.1-201ENST00000491725 852 ntBASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV17A0A0B4J275 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV17A0A0B4J275 AC006333.2-201ENST00000607957 2099 ntBASIC16.93■□□□□ 0.3
TRAV17A0A0B4J275 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV17A0A0B4J275 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms