Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-9Q9BYQ8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 ZNF885P-201ENST00000420174 1098 ntBASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 MTATP6P17-201ENST00000431030 672 ntBASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 RSL24D1P2-201ENST00000445584 366 ntBASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 ABHD17AP5-201ENST00000580133 923 ntBASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-9Q9BYQ8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC073310.1-201ENST00000423226 1033 ntBASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 DUX4L29-201ENST00000425409 679 ntBASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC007688.1-201ENST00000475592 759 ntBASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC112220.4-201ENST00000604982 1263 ntBASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 AL021368.1-201ENST00000607490 540 ntBASIC9.23□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 AL133380.1-201ENST00000506013 324 ntBASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 MTND4LP25-201ENST00000570218 163 ntBASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 FGA-203ENST00000622532 1130 ntTSL 5 BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-9Q9BYQ8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 RARRES2P2-201ENST00000394842 485 ntBASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC093534.1-201ENST00000504977 132 ntBASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 MEF2C-AS1-206ENST00000511100 828 ntTSL 3 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 SNORA59B-202ENST00000578183 701 ntBASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC018358.1-201ENST00000631079 1402 ntBASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-9Q9BYQ8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 MTCYBP11-201ENST00000447254 1109 ntBASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC005066.1-201ENST00000613582 1007 ntBASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
KRTAP4-9Q9BYQ8 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC083799.1-201ENST00000366451 910 ntBASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-9Q9BYQ8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms