Protein–RNA interactions for Protein: Q9BWM5

ZNF416, Zinc finger protein 416, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF416Q9BWM5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
ZNF416Q9BWM5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF416Q9BWM5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF416Q9BWM5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ZNF416Q9BWM5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ZNF416Q9BWM5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF416Q9BWM5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF416Q9BWM5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ZNF416Q9BWM5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF416Q9BWM5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF416Q9BWM5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF416Q9BWM5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF416Q9BWM5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF416Q9BWM5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF416Q9BWM5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZNF416Q9BWM5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF416Q9BWM5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF416Q9BWM5 AC110285.7-201ENST00000624417 1536 ntBASIC22.22■■□□□ 1.15
ZNF416Q9BWM5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ZNF416Q9BWM5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ZNF416Q9BWM5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZNF416Q9BWM5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.21■■□□□ 1.15
ZNF416Q9BWM5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZNF416Q9BWM5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.2■■□□□ 1.14
ZNF416Q9BWM5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.2■■□□□ 1.14
ZNF416Q9BWM5 AC018358.1-201ENST00000631079 1402 ntBASIC22.2■■□□□ 1.14
ZNF416Q9BWM5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ZNF416Q9BWM5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZNF416Q9BWM5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZNF416Q9BWM5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZNF416Q9BWM5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZNF416Q9BWM5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZNF416Q9BWM5 LINC01971-201ENST00000617888 1048 ntBASIC22.18■■□□□ 1.14
ZNF416Q9BWM5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.17■■□□□ 1.14
ZNF416Q9BWM5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZNF416Q9BWM5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZNF416Q9BWM5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
ZNF416Q9BWM5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZNF416Q9BWM5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ZNF416Q9BWM5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.13■■□□□ 1.13
ZNF416Q9BWM5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.13■■□□□ 1.13
ZNF416Q9BWM5 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.13■■□□□ 1.13
ZNF416Q9BWM5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.13■■□□□ 1.13
ZNF416Q9BWM5 AL121749.1-202ENST00000609313 2153 ntBASIC22.12■■□□□ 1.13
ZNF416Q9BWM5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZNF416Q9BWM5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZNF416Q9BWM5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZNF416Q9BWM5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ZNF416Q9BWM5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZNF416Q9BWM5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
ZNF416Q9BWM5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZNF416Q9BWM5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZNF416Q9BWM5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZNF416Q9BWM5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L13-201ENST00000554103 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L15-201ENST00000611059 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L11-201ENST00000611504 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L12-201ENST00000614593 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L23-201ENST00000615195 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L24-201ENST00000617576 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L22-201ENST00000618238 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L20-201ENST00000619712 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L14-201ENST00000621227 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L21-201ENST00000622058 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L10-201ENST00000622460 1267 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 DUX4L25-201ENST00000624915 1269 ntBASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF416Q9BWM5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZNF416Q9BWM5 HLA-V-202ENST00000446817 847 ntBASIC22.08■■□□□ 1.13
ZNF416Q9BWM5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ZNF416Q9BWM5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ZNF416Q9BWM5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
ZNF416Q9BWM5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF416Q9BWM5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF416Q9BWM5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF416Q9BWM5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.07■■□□□ 1.12
ZNF416Q9BWM5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF416Q9BWM5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms