Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CCDC60Q8IWA6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CCDC60Q8IWA6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 AC022413.1-201ENST00000624602 984 ntBASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.24■■■□□ 2.11
CCDC60Q8IWA6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
CCDC60Q8IWA6 AP002414.2-202ENST00000590929 1450 ntBASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 RARRES2P2-201ENST00000394842 485 ntBASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC60Q8IWA6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC60Q8IWA6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 AC060814.1-201ENST00000554326 538 ntBASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 RNF126P1-201ENST00000567452 1320 ntBASIC28.19■■■□□ 2.1
CCDC60Q8IWA6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC60Q8IWA6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC60Q8IWA6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC60Q8IWA6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CCDC60Q8IWA6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 AC092296.2-201ENST00000589470 999 ntBASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 DRD5P2-201ENST00000421395 2012 ntBASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms