Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC60Q8IWA6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC60Q8IWA6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CCDC60Q8IWA6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CCDC60Q8IWA6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 AC022413.1-201ENST00000624602 984 ntBASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC60Q8IWA6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC60Q8IWA6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.24■■■□□ 2.11
CCDC60Q8IWA6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
CCDC60Q8IWA6 AP002414.2-202ENST00000590929 1450 ntBASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC60Q8IWA6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 RARRES2P2-201ENST00000394842 485 ntBASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC60Q8IWA6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC60Q8IWA6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC60Q8IWA6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC60Q8IWA6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 AC060814.1-201ENST00000554326 538 ntBASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CCDC60Q8IWA6 RNF126P1-201ENST00000567452 1320 ntBASIC28.19■■■□□ 2.1
CCDC60Q8IWA6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC60Q8IWA6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC60Q8IWA6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC60Q8IWA6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC60Q8IWA6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CCDC60Q8IWA6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.13■■■□□ 2.09
CCDC60Q8IWA6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC60Q8IWA6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC60Q8IWA6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC60Q8IWA6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC60Q8IWA6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CCDC60Q8IWA6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CCDC60Q8IWA6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 AC092296.2-201ENST00000589470 999 ntBASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC60Q8IWA6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC60Q8IWA6 DRD5P2-201ENST00000421395 2012 ntBASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC60Q8IWA6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms