Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CASC1Q6TDU7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.65■■■□□ 2.5
CASC1Q6TDU7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.64■■■□□ 2.5
CASC1Q6TDU7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.64■■■□□ 2.5
CASC1Q6TDU7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CASC1Q6TDU7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CASC1Q6TDU7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CASC1Q6TDU7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CASC1Q6TDU7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CASC1Q6TDU7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CASC1Q6TDU7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CASC1Q6TDU7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CASC1Q6TDU7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.61■■■□□ 2.49
CASC1Q6TDU7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CASC1Q6TDU7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
CASC1Q6TDU7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CASC1Q6TDU7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CASC1Q6TDU7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CASC1Q6TDU7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CASC1Q6TDU7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CASC1Q6TDU7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CASC1Q6TDU7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CASC1Q6TDU7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CASC1Q6TDU7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.57■■■□□ 2.48
CASC1Q6TDU7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CASC1Q6TDU7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CASC1Q6TDU7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CASC1Q6TDU7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
CASC1Q6TDU7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.56■■■□□ 2.48
CASC1Q6TDU7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.56■■■□□ 2.48
CASC1Q6TDU7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
CASC1Q6TDU7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.54■■■□□ 2.48
CASC1Q6TDU7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CASC1Q6TDU7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CASC1Q6TDU7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CASC1Q6TDU7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.51■■■□□ 2.48
CASC1Q6TDU7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CASC1Q6TDU7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CASC1Q6TDU7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CASC1Q6TDU7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
CASC1Q6TDU7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.5■■■□□ 2.47
CASC1Q6TDU7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.5■■■□□ 2.47
CASC1Q6TDU7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 DUX4L29-201ENST00000425409 679 ntBASIC30.49■■■□□ 2.47
CASC1Q6TDU7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.49■■■□□ 2.47
CASC1Q6TDU7 AC110285.7-201ENST00000624417 1536 ntBASIC30.48■■■□□ 2.47
CASC1Q6TDU7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.48■■■□□ 2.47
CASC1Q6TDU7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CASC1Q6TDU7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
CASC1Q6TDU7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CASC1Q6TDU7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CASC1Q6TDU7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CASC1Q6TDU7 AC021231.2-201ENST00000594613 730 ntBASIC30.47■■■□□ 2.47
CASC1Q6TDU7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CASC1Q6TDU7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CASC1Q6TDU7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CASC1Q6TDU7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CASC1Q6TDU7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
CASC1Q6TDU7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CASC1Q6TDU7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.45■■■□□ 2.46
CASC1Q6TDU7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
CASC1Q6TDU7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.44■■■□□ 2.46
CASC1Q6TDU7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CASC1Q6TDU7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CASC1Q6TDU7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CASC1Q6TDU7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CASC1Q6TDU7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.42■■■□□ 2.46
CASC1Q6TDU7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
CASC1Q6TDU7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CASC1Q6TDU7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CASC1Q6TDU7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.41■■■□□ 2.46
CASC1Q6TDU7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CASC1Q6TDU7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CASC1Q6TDU7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CASC1Q6TDU7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CASC1Q6TDU7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CASC1Q6TDU7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
CASC1Q6TDU7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.37■■■□□ 2.45
CASC1Q6TDU7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CASC1Q6TDU7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CASC1Q6TDU7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.36■■■□□ 2.45
CASC1Q6TDU7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.36■■■□□ 2.45
CASC1Q6TDU7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CASC1Q6TDU7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.35■■■□□ 2.45
CASC1Q6TDU7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.35■■■□□ 2.45
CASC1Q6TDU7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms