Protein–RNA interactions for Protein: P89105

CTR9, RNA polymerase-associated protein CTR9, yeastyeast

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR9P89105 tA(AGC)JtA(AGC)J 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)K1tA(AGC)K1 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)K2tA(AGC)K2 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)LtA(AGC)L 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)M1tA(AGC)M1 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)M2tA(AGC)M2 73 nt8.58□□□□□ -1.04
CTR9P89105 tA(AGC)PtA(AGC)P 73 nt8.58□□□□□ -1.04
CTR9P89105 FLX1YIL134W 936 nt8.58□□□□□ -1.04
CTR9P89105 APT1YML022W 564 nt8.58□□□□□ -1.04
CTR9P89105 PGC1YPL206C 966 nt8.58□□□□□ -1.04
CTR9P89105 GET2YER083C 858 nt8.57□□□□□ -1.04
CTR9P89105 MRS3YJL133W 945 nt8.57□□□□□ -1.04
CTR9P89105 STP3YLR375W 1032 nt8.57□□□□□ -1.04
CTR9P89105 RRP1YDR087C 837 nt8.56□□□□□ -1.04
CTR9P89105 RAD51YER095W 1203 nt8.56□□□□□ -1.04
CTR9P89105 GTS1YGL181W 1191 nt8.56□□□□□ -1.04
CTR9P89105 CYC3YAL039C 810 nt8.56□□□□□ -1.04
CTR9P89105 AOS1YPR180W 1044 nt8.56□□□□□ -1.04
CTR9P89105 SRF1YDL133W 1314 nt8.55□□□□□ -1.04
CTR9P89105 YCR049CYCR049C 447 nt8.55□□□□□ -1.04
CTR9P89105 HAM1YJR069C 594 nt8.55□□□□□ -1.04
CTR9P89105 YNL234WYNL234W 1281 nt8.55□□□□□ -1.04
CTR9P89105 IPL1YPL209C 1104 nt8.55□□□□□ -1.04
CTR9P89105 RHO1YPR165W 630 nt8.55□□□□□ -1.04
CTR9P89105 THI73YLR004C 1572 nt8.55□□□□□ -1.04
CTR9P89105 CAN1YEL063C 1773 nt8.53□□□□□ -1.04
CTR9P89105 DST1YGL043W 930 nt8.53□□□□□ -1.04
CTR9P89105 tS(GCU)LtS(GCU)L 80 nt8.53□□□□□ -1.04
CTR9P89105 MLS1YNL117W 1665 nt8.53□□□□□ -1.04
CTR9P89105 SSC1YJR045C 1965 nt8.52□□□□□ -1.05
CTR9P89105 TPI1YDR050C 747 nt8.52□□□□□ -1.05
CTR9P89105 PPZ2YDR436W 2133 nt8.52□□□□□ -1.05
CTR9P89105 YHL030W-AYHL030W-A 462 nt8.52□□□□□ -1.05
CTR9P89105 LSM12YHR121W 564 nt8.52□□□□□ -1.05
CTR9P89105 ERV25YML012W 636 nt8.52□□□□□ -1.05
CTR9P89105 GAT1YFL021W 1533 nt8.52□□□□□ -1.05
CTR9P89105 ERO1YML130C 1692 nt8.52□□□□□ -1.05
CTR9P89105 PDC6YGR087C 1692 nt8.51□□□□□ -1.05
CTR9P89105 MPC1YGL080W 393 nt8.51□□□□□ -1.05
CTR9P89105 SRP102YKL154W 735 nt8.51□□□□□ -1.05
CTR9P89105 OCH1YGL038C 1443 nt8.51□□□□□ -1.05
CTR9P89105 MMS21YEL019C 804 nt8.5□□□□□ -1.05
CTR9P89105 YEL023CYEL023C 2049 nt8.5□□□□□ -1.05
CTR9P89105 NPL6YMR091C 1308 nt8.5□□□□□ -1.05
CTR9P89105 HDA1YNL021W 2121 nt8.5□□□□□ -1.05
CTR9P89105 CKI1YLR133W 1749 nt8.49□□□□□ -1.05
CTR9P89105 YMR306C-AYMR306C-A 390 nt8.49□□□□□ -1.05
CTR9P89105 OCA1YNL099C 717 nt8.49□□□□□ -1.05
CTR9P89105 CWC25YNL245C 540 nt8.49□□□□□ -1.05
CTR9P89105 COA2YPL189C-A 207 nt8.49□□□□□ -1.05
CTR9P89105 PRE2YPR103W 864 nt8.49□□□□□ -1.05
CTR9P89105 SEC23YPR181C 2307 nt8.49□□□□□ -1.05
CTR9P89105 PUP3YER094C 618 nt8.48□□□□□ -1.05
CTR9P89105 YOR012WYOR012W 414 nt8.48□□□□□ -1.05
CTR9P89105 MSS51YLR203C 1311 nt8.48□□□□□ -1.05
CTR9P89105 NUP84YDL116W 2181 nt8.47□□□□□ -1.05
CTR9P89105 CAK1YFL029C 1107 nt8.47□□□□□ -1.05
CTR9P89105 HRA1HRA1 564 nt8.47□□□□□ -1.05
CTR9P89105 LOT6YLR011W 576 nt8.47□□□□□ -1.05
CTR9P89105 YPR150WYPR150W 522 nt8.47□□□□□ -1.05
CTR9P89105 PCL10YGL134W 1302 nt8.47□□□□□ -1.05
CTR9P89105 FCY2YER056C 1602 nt8.47□□□□□ -1.05
CTR9P89105 YCR025CYCR025C 411 nt8.46□□□□□ -1.06
CTR9P89105 HHY1YEL059W 309 nt8.46□□□□□ -1.06
CTR9P89105 EFM1YHL039W 1758 nt8.45□□□□□ -1.06
CTR9P89105 TAF4YMR005W 1167 nt8.45□□□□□ -1.06
CTR9P89105 ICL2YPR006C 1728 nt8.44□□□□□ -1.06
CTR9P89105 YPT31YER031C 672 nt8.44□□□□□ -1.06
CTR9P89105 SNF4YGL115W 969 nt8.44□□□□□ -1.06
CTR9P89105 YPL168WYPL168W 1293 nt8.44□□□□□ -1.06
CTR9P89105 YBR232CYBR232C 360 nt8.44□□□□□ -1.06
CTR9P89105 YPL277CYPL277C 1464 nt8.44□□□□□ -1.06
CTR9P89105 TGA1tA(UGC)A 73 nt8.43□□□□□ -1.06
CTR9P89105 tA(UGC)EtA(UGC)E 73 nt8.43□□□□□ -1.06
CTR9P89105 tA(UGC)GtA(UGC)G 73 nt8.43□□□□□ -1.06
CTR9P89105 tA(UGC)LtA(UGC)L 73 nt8.43□□□□□ -1.06
CTR9P89105 tA(UGC)OtA(UGC)O 73 nt8.43□□□□□ -1.06
CTR9P89105 TRR1YDR353W 960 nt8.43□□□□□ -1.06
CTR9P89105 YMR166CYMR166C 1107 nt8.43□□□□□ -1.06
CTR9P89105 LSP1YPL004C 1026 nt8.43□□□□□ -1.06
CTR9P89105 RQC1YDR333C 2172 nt8.43□□□□□ -1.06
CTR9P89105 KIN1YDR122W 3195 nt8.43□□□□□ -1.06
CTR9P89105 AI3Q0060 1248 nt8.42□□□□□ -1.06
CTR9P89105 SNF7YLR025W 723 nt8.42□□□□□ -1.06
CTR9P89105 EXG2YDR261C 1689 nt8.42□□□□□ -1.06
CTR9P89105 EDC3YEL015W 1656 nt8.42□□□□□ -1.06
CTR9P89105 YGR210CYGR210C 1236 nt8.41□□□□□ -1.06
CTR9P89105 PET10YKR046C 852 nt8.41□□□□□ -1.06
CTR9P89105 YGL260WYGL260W 231 nt8.4□□□□□ -1.06
CTR9P89105 PAC10YGR078C 600 nt8.4□□□□□ -1.06
CTR9P89105 SER2YGR208W 930 nt8.4□□□□□ -1.06
CTR9P89105 PRY2YKR013W 990 nt8.4□□□□□ -1.06
CTR9P89105 MNN9YPL050C 1188 nt8.4□□□□□ -1.06
CTR9P89105 YDR215CYDR215C 414 nt8.39□□□□□ -1.07
CTR9P89105 NUP57YGR119C 1626 nt8.39□□□□□ -1.07
CTR9P89105 FCY1YPR062W 477 nt8.38□□□□□ -1.07
CTR9P89105 MRPL36YBR122C 534 nt8.38□□□□□ -1.07
CTR9P89105 YER147C-AYER147C-A 411 nt8.37□□□□□ -1.07
CTR9P89105 CAR2YLR438W 1275 nt8.37□□□□□ -1.07
CTR9P89105 PRE10YOR362C 867 nt8.37□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 45.2 ms