Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cpne2P59108 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne2P59108 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne2P59108 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne2P59108 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne2P59108 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne2P59108 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne2P59108 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne2P59108 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne2P59108 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.15■□□□□ 0.66
Cpne2P59108 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpne2P59108 Gm24970-201ENSMUST00000175582 82 ntBASIC19.14■□□□□ 0.65
Cpne2P59108 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cpne2P59108 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne2P59108 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cpne2P59108 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne2P59108 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne2P59108 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne2P59108 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne2P59108 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cpne2P59108 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne2P59108 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne2P59108 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne2P59108 Gm45855-201ENSMUST00000212546 880 ntBASIC19.11■□□□□ 0.65
Cpne2P59108 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne2P59108 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Cpne2P59108 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne2P59108 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne2P59108 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpne2P59108 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne2P59108 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne2P59108 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne2P59108 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.1■□□□□ 0.65
Cpne2P59108 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cpne2P59108 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne2P59108 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne2P59108 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.09■□□□□ 0.65
Cpne2P59108 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.08■□□□□ 0.65
Cpne2P59108 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpne2P59108 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.08■□□□□ 0.64
Cpne2P59108 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne2P59108 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne2P59108 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.07■□□□□ 0.64
Cpne2P59108 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne2P59108 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne2P59108 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cpne2P59108 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne2P59108 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpne2P59108 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne2P59108 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cpne2P59108 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.05■□□□□ 0.64
Cpne2P59108 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpne2P59108 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne2P59108 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne2P59108 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.04■□□□□ 0.64
Cpne2P59108 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne2P59108 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne2P59108 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cpne2P59108 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.03■□□□□ 0.64
Cpne2P59108 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne2P59108 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cpne2P59108 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.02■□□□□ 0.64
Cpne2P59108 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne2P59108 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne2P59108 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne2P59108 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne2P59108 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne2P59108 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cpne2P59108 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cpne2P59108 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne2P59108 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Cpne2P59108 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne2P59108 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne2P59108 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms