Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TM4SF1P30408 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TM4SF1P30408 AL592293.1-201ENST00000502889 1188 ntBASIC32.02■■■□□ 2.72
TM4SF1P30408 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.02■■■□□ 2.72
TM4SF1P30408 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TM4SF1P30408 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TM4SF1P30408 AC009831.1-201ENST00000580420 1582 ntBASIC32.02■■■□□ 2.72
TM4SF1P30408 DUX4L18-201ENST00000553347 1267 ntBASIC32.01■■■□□ 2.71
TM4SF1P30408 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
TM4SF1P30408 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.99■■■□□ 2.71
TM4SF1P30408 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
TM4SF1P30408 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
TM4SF1P30408 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.98■■■□□ 2.71
TM4SF1P30408 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TM4SF1P30408 AC133552.2-201ENST00000619106 1032 ntBASIC31.98■■■□□ 2.71
TM4SF1P30408 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TM4SF1P30408 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TM4SF1P30408 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TM4SF1P30408 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TM4SF1P30408 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.96■■■□□ 2.71
TM4SF1P30408 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TM4SF1P30408 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TM4SF1P30408 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TM4SF1P30408 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
TM4SF1P30408 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TM4SF1P30408 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
TM4SF1P30408 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TM4SF1P30408 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TM4SF1P30408 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TM4SF1P30408 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.94■■■□□ 2.7
TM4SF1P30408 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TM4SF1P30408 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.93■■■□□ 2.7
TM4SF1P30408 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TM4SF1P30408 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
TM4SF1P30408 AL035685.1-201ENST00000636663 812 ntBASIC31.92■■■□□ 2.7
TM4SF1P30408 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.92■■■□□ 2.7
TM4SF1P30408 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.91■■■□□ 2.7
TM4SF1P30408 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TM4SF1P30408 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TM4SF1P30408 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TM4SF1P30408 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.9■■■□□ 2.7
TM4SF1P30408 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.89■■■□□ 2.7
TM4SF1P30408 AL451085.2-201ENST00000605085 799 ntBASIC31.89■■■□□ 2.7
TM4SF1P30408 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TM4SF1P30408 SMPD5-203ENST00000639008 1464 ntBASIC31.89■■■□□ 2.7
TM4SF1P30408 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
TM4SF1P30408 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
TM4SF1P30408 AC026202.3-201ENST00000600805 1127 ntBASIC31.88■■■□□ 2.69
TM4SF1P30408 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
TM4SF1P30408 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
TM4SF1P30408 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TM4SF1P30408 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.86■■■□□ 2.69
TM4SF1P30408 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TM4SF1P30408 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TM4SF1P30408 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.86■■■□□ 2.69
TM4SF1P30408 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.85■■■□□ 2.69
TM4SF1P30408 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TM4SF1P30408 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.84■■■□□ 2.69
TM4SF1P30408 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TM4SF1P30408 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TM4SF1P30408 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.83■■■□□ 2.69
TM4SF1P30408 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.83■■■□□ 2.69
TM4SF1P30408 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
TM4SF1P30408 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.82■■■□□ 2.68
TM4SF1P30408 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TM4SF1P30408 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
TM4SF1P30408 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TM4SF1P30408 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.81■■■□□ 2.68
TM4SF1P30408 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TM4SF1P30408 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TM4SF1P30408 AC025884.2-201ENST00000553429 711 ntBASIC31.8■■■□□ 2.68
TM4SF1P30408 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
TM4SF1P30408 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
TM4SF1P30408 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TM4SF1P30408 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TM4SF1P30408 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
TM4SF1P30408 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
TM4SF1P30408 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.78■■■□□ 2.68
TM4SF1P30408 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TM4SF1P30408 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.78■■■□□ 2.68
TM4SF1P30408 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TM4SF1P30408 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.77■■■□□ 2.68
TM4SF1P30408 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
TM4SF1P30408 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
TM4SF1P30408 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.77■■■□□ 2.68
TM4SF1P30408 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TM4SF1P30408 DUX4L9-201ENST00000449051 1259 ntBASIC31.76■■■□□ 2.67
TM4SF1P30408 AL359258.2-201ENST00000564063 1566 ntBASIC31.76■■■□□ 2.67
TM4SF1P30408 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TM4SF1P30408 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TM4SF1P30408 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TM4SF1P30408 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TM4SF1P30408 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TM4SF1P30408 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TM4SF1P30408 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.72■■■□□ 2.67
TM4SF1P30408 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
TM4SF1P30408 AL592295.1-201ENST00000400984 884 ntBASIC31.71■■■□□ 2.67
TM4SF1P30408 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
TM4SF1P30408 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TM4SF1P30408 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms