Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PF4V1P10720 GPX1-201ENST00000419349 1106 ntBASIC19.86■□□□□ 0.77
PF4V1P10720 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PF4V1P10720 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.85■□□□□ 0.77
PF4V1P10720 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.85■□□□□ 0.77
PF4V1P10720 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 AC008813.1-201ENST00000536597 885 ntBASIC19.85■□□□□ 0.77
PF4V1P10720 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.85■□□□□ 0.77
PF4V1P10720 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PF4V1P10720 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PF4V1P10720 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PF4V1P10720 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PF4V1P10720 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PF4V1P10720 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PF4V1P10720 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.84■□□□□ 0.77
PF4V1P10720 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PF4V1P10720 RARRES2P2-201ENST00000394842 485 ntBASIC19.83■□□□□ 0.77
PF4V1P10720 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.83■□□□□ 0.77
PF4V1P10720 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PF4V1P10720 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PF4V1P10720 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.82■□□□□ 0.76
PF4V1P10720 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.82■□□□□ 0.76
PF4V1P10720 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PF4V1P10720 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PF4V1P10720 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PF4V1P10720 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PF4V1P10720 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.81■□□□□ 0.76
PF4V1P10720 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PF4V1P10720 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.81■□□□□ 0.76
PF4V1P10720 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PF4V1P10720 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PF4V1P10720 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PF4V1P10720 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PF4V1P10720 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PF4V1P10720 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PF4V1P10720 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
PF4V1P10720 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PF4V1P10720 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PF4V1P10720 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PF4V1P10720 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PF4V1P10720 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PF4V1P10720 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PF4V1P10720 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PF4V1P10720 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PF4V1P10720 ABHD17AP5-201ENST00000580133 923 ntBASIC19.78■□□□□ 0.76
PF4V1P10720 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PF4V1P10720 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PF4V1P10720 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PF4V1P10720 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PF4V1P10720 AC022413.1-201ENST00000624602 984 ntBASIC19.77■□□□□ 0.76
PF4V1P10720 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PF4V1P10720 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PF4V1P10720 RNF126P1-201ENST00000567452 1320 ntBASIC19.76■□□□□ 0.75
PF4V1P10720 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.76■□□□□ 0.75
PF4V1P10720 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PF4V1P10720 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PF4V1P10720 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.76■□□□□ 0.75
PF4V1P10720 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PF4V1P10720 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PF4V1P10720 AP002414.2-202ENST00000590929 1450 ntBASIC19.75■□□□□ 0.75
PF4V1P10720 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PF4V1P10720 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PF4V1P10720 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PF4V1P10720 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PF4V1P10720 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.74■□□□□ 0.75
PF4V1P10720 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 DRD5P2-201ENST00000421395 2012 ntBASIC19.73■□□□□ 0.75
PF4V1P10720 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.73■□□□□ 0.75
PF4V1P10720 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.73■□□□□ 0.75
PF4V1P10720 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PF4V1P10720 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PF4V1P10720 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PF4V1P10720 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PF4V1P10720 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.71■□□□□ 0.75
PF4V1P10720 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PF4V1P10720 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PF4V1P10720 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.71■□□□□ 0.75
PF4V1P10720 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PF4V1P10720 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PF4V1P10720 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms