Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 AC108673.1-201ENST00000510422 1159 ntBASIC20.57■□□□□ 0.88
RAMP3O60896 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.57■□□□□ 0.88
RAMP3O60896 MIR6090-201ENST00000622481 60 ntBASIC20.57■□□□□ 0.88
RAMP3O60896 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAMP3O60896 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAMP3O60896 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.56■□□□□ 0.88
RAMP3O60896 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.55■□□□□ 0.88
RAMP3O60896 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAMP3O60896 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAMP3O60896 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.55■□□□□ 0.88
RAMP3O60896 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
RAMP3O60896 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAMP3O60896 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAMP3O60896 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAMP3O60896 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.53■□□□□ 0.88
RAMP3O60896 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAMP3O60896 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.53■□□□□ 0.88
RAMP3O60896 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
RAMP3O60896 AC018358.1-201ENST00000631079 1402 ntBASIC20.53■□□□□ 0.88
RAMP3O60896 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAMP3O60896 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAMP3O60896 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.52■□□□□ 0.88
RAMP3O60896 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAMP3O60896 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAMP3O60896 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAMP3O60896 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAMP3O60896 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAMP3O60896 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAMP3O60896 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAMP3O60896 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.51■□□□□ 0.87
RAMP3O60896 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAMP3O60896 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RAMP3O60896 LINC00273-201ENST00000539813 1452 ntBASIC20.5■□□□□ 0.87
RAMP3O60896 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAMP3O60896 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RAMP3O60896 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.5■□□□□ 0.87
RAMP3O60896 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAMP3O60896 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAMP3O60896 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RAMP3O60896 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAMP3O60896 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.49■□□□□ 0.87
RAMP3O60896 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAMP3O60896 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAMP3O60896 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAMP3O60896 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.48■□□□□ 0.87
RAMP3O60896 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAMP3O60896 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAMP3O60896 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAMP3O60896 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAMP3O60896 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAMP3O60896 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAMP3O60896 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.47■□□□□ 0.87
RAMP3O60896 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RAMP3O60896 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RAMP3O60896 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.46■□□□□ 0.87
RAMP3O60896 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAMP3O60896 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAMP3O60896 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RAMP3O60896 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAMP3O60896 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAMP3O60896 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAMP3O60896 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAMP3O60896 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAMP3O60896 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.45■□□□□ 0.86
RAMP3O60896 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.45■□□□□ 0.86
RAMP3O60896 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.45■□□□□ 0.86
RAMP3O60896 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.44■□□□□ 0.86
RAMP3O60896 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAMP3O60896 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAMP3O60896 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAMP3O60896 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAMP3O60896 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.43■□□□□ 0.86
RAMP3O60896 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RAMP3O60896 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RAMP3O60896 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.43■□□□□ 0.86
RAMP3O60896 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RAMP3O60896 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAMP3O60896 AL449106.1-201ENST00000608517 1980 ntBASIC20.43■□□□□ 0.86
RAMP3O60896 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.42■□□□□ 0.86
RAMP3O60896 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.42■□□□□ 0.86
RAMP3O60896 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.42■□□□□ 0.86
RAMP3O60896 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAMP3O60896 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAMP3O60896 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.41■□□□□ 0.86
RAMP3O60896 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAMP3O60896 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAMP3O60896 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RAMP3O60896 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAMP3O60896 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAMP3O60896 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAMP3O60896 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAMP3O60896 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAMP3O60896 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RAMP3O60896 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.38■□□□□ 0.85
RAMP3O60896 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAMP3O60896 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAMP3O60896 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAMP3O60896 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAMP3O60896 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAMP3O60896 HLA-V-202ENST00000446817 847 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms