RNA–Protein interactions for RNA: ENST00000640707.1

STRADA-248, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,300 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-248ENST00000640707 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
STRADA-248ENST00000640707 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
STRADA-248ENST00000640707 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
STRADA-248ENST00000640707 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
STRADA-248ENST00000640707 FOXD1Q16676 465 aa22.02■■□□□ 1.12
STRADA-248ENST00000640707 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
STRADA-248ENST00000640707 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
STRADA-248ENST00000640707 ADRA2BP18089 450 aa20.83■□□□□ 0.93
STRADA-248ENST00000640707 PIAS4Q8N2W9 510 aaPredicted RBP20.62■□□□□ 0.89
STRADA-248ENST00000640707 MSH5O43196 834 aa20.38■□□□□ 0.85
STRADA-248ENST00000640707 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
STRADA-248ENST00000640707 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
STRADA-248ENST00000640707 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
STRADA-248ENST00000640707 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
STRADA-248ENST00000640707 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
STRADA-248ENST00000640707 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
STRADA-248ENST00000640707 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
STRADA-248ENST00000640707 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
STRADA-248ENST00000640707 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
STRADA-248ENST00000640707 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
STRADA-248ENST00000640707 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
STRADA-248ENST00000640707 KCNA4P22459 653 aa18.01■□□□□ 0.47
STRADA-248ENST00000640707 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
STRADA-248ENST00000640707 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
STRADA-248ENST00000640707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
STRADA-248ENST00000640707 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
STRADA-248ENST00000640707 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
STRADA-248ENST00000640707 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
STRADA-248ENST00000640707 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
STRADA-248ENST00000640707 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
STRADA-248ENST00000640707 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
STRADA-248ENST00000640707 CAPN15O75808 1086 aa16.67■□□□□ 0.26
STRADA-248ENST00000640707 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
STRADA-248ENST00000640707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
STRADA-248ENST00000640707 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
STRADA-248ENST00000640707 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
STRADA-248ENST00000640707 ZBTB22O15209 634 aa16.59■□□□□ 0.25
STRADA-248ENST00000640707 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
STRADA-248ENST00000640707 APLP2Q06481 763 aa16.52■□□□□ 0.24
STRADA-248ENST00000640707 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
STRADA-248ENST00000640707 DSG3P32926 999 aa16.49■□□□□ 0.23
STRADA-248ENST00000640707 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
STRADA-248ENST00000640707 ABCB7O75027 752 aa16.34■□□□□ 0.21
STRADA-248ENST00000640707 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
STRADA-248ENST00000640707 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
STRADA-248ENST00000640707 POLA2Q14181 598 aa16.14■□□□□ 0.17
STRADA-248ENST00000640707 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
STRADA-248ENST00000640707 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
STRADA-248ENST00000640707 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
STRADA-248ENST00000640707 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
STRADA-248ENST00000640707 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
STRADA-248ENST00000640707 MKRN4PQ13434 485 aaPredicted RBP15.54■□□□□ 0.08
STRADA-248ENST00000640707 FBLN2P98095 1184 aa15.53■□□□□ 0.08
STRADA-248ENST00000640707 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
STRADA-248ENST00000640707 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
STRADA-248ENST00000640707 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
STRADA-248ENST00000640707 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
STRADA-248ENST00000640707 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
STRADA-248ENST00000640707 POTEHQ6S545 545 aa15.24■□□□□ 0.03
STRADA-248ENST00000640707 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
STRADA-248ENST00000640707 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
STRADA-248ENST00000640707 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
STRADA-248ENST00000640707 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
STRADA-248ENST00000640707 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
STRADA-248ENST00000640707 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
STRADA-248ENST00000640707 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
STRADA-248ENST00000640707 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
STRADA-248ENST00000640707 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
STRADA-248ENST00000640707 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
STRADA-248ENST00000640707 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
STRADA-248ENST00000640707 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
STRADA-248ENST00000640707 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
STRADA-248ENST00000640707 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
STRADA-248ENST00000640707 PROM2Q8N271 834 aa14.63□□□□□ -0.07
STRADA-248ENST00000640707 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
STRADA-248ENST00000640707 FKBP8Q14318 412 aa14.61□□□□□ -0.07
STRADA-248ENST00000640707 HAX1O00165 279 aa14.59□□□□□ -0.07
STRADA-248ENST00000640707 EVX2Q03828 476 aa14.5□□□□□ -0.09
STRADA-248ENST00000640707 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
STRADA-248ENST00000640707 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
STRADA-248ENST00000640707 SP7Q8TDD2 431 aaPredicted RBP14.43□□□□□ -0.1
STRADA-248ENST00000640707 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
STRADA-248ENST00000640707 MNX1P50219 401 aaPredicted RBP14.3□□□□□ -0.12
STRADA-248ENST00000640707 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
STRADA-248ENST00000640707 MIER1Q8N108 512 aa14.22□□□□□ -0.13
STRADA-248ENST00000640707 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
STRADA-248ENST00000640707 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
STRADA-248ENST00000640707 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
STRADA-248ENST00000640707 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
STRADA-248ENST00000640707 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.15
STRADA-248ENST00000640707 GABBR2O75899 941 aa14.14□□□□□ -0.15
STRADA-248ENST00000640707 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
STRADA-248ENST00000640707 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
STRADA-248ENST00000640707 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
STRADA-248ENST00000640707 PHF12Q96QT6 1004 aa14□□□□□ -0.17
STRADA-248ENST00000640707 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
STRADA-248ENST00000640707 VASPP50552 380 aaPredicted RBP13.98□□□□□ -0.17
STRADA-248ENST00000640707 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
STRADA-248ENST00000640707 ABCC9O60706 1549 aa13.95□□□□□ -0.18
STRADA-248ENST00000640707 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms