RNA–Protein interactions for RNA: ENST00000639389.1

ZEB2-247, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 5

Gene ZEB2, Length 1,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-247ENST00000639389 AEBP2Q6ZN18 517 aaPredicted RBP30.34■■■□□ 2.45
ZEB2-247ENST00000639389 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
ZEB2-247ENST00000639389 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
ZEB2-247ENST00000639389 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
ZEB2-247ENST00000639389 FOXD1Q16676 465 aa23.95■■□□□ 1.42
ZEB2-247ENST00000639389 PLPPR3Q6T4P5 718 aa23.71■■□□□ 1.39
ZEB2-247ENST00000639389 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
ZEB2-247ENST00000639389 ADRA2BP18089 450 aa22.8■■□□□ 1.24
ZEB2-247ENST00000639389 PIAS4Q8N2W9 510 aaPredicted RBP22.48■■□□□ 1.19
ZEB2-247ENST00000639389 MSH5O43196 834 aa22.17■■□□□ 1.14
ZEB2-247ENST00000639389 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
ZEB2-247ENST00000639389 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
ZEB2-247ENST00000639389 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.91
ZEB2-247ENST00000639389 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
ZEB2-247ENST00000639389 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
ZEB2-247ENST00000639389 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
ZEB2-247ENST00000639389 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
ZEB2-247ENST00000639389 KCNA4P22459 653 aa20.09■□□□□ 0.81
ZEB2-247ENST00000639389 HOXD11P31277 338 aaPredicted RBP20.02■□□□□ 0.8
ZEB2-247ENST00000639389 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.79
ZEB2-247ENST00000639389 NPM3O75607 178 aaKnown RBP19.95■□□□□ 0.78
ZEB2-247ENST00000639389 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
ZEB2-247ENST00000639389 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
ZEB2-247ENST00000639389 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
ZEB2-247ENST00000639389 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
ZEB2-247ENST00000639389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.631e-6■■□□□ 13.8
ZEB2-247ENST00000639389 RNF39Q9H2S5 420 aa19■□□□□ 0.63
ZEB2-247ENST00000639389 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
ZEB2-247ENST00000639389 C1QBPQ07021 282 aaKnown RBP18.74■□□□□ 0.59
ZEB2-247ENST00000639389 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
ZEB2-247ENST00000639389 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
ZEB2-247ENST00000639389 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
ZEB2-247ENST00000639389 ZBTB22O15209 634 aa18.49■□□□□ 0.55
ZEB2-247ENST00000639389 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
ZEB2-247ENST00000639389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
ZEB2-247ENST00000639389 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
ZEB2-247ENST00000639389 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
ZEB2-247ENST00000639389 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
ZEB2-247ENST00000639389 APLP2Q06481 763 aa18.22■□□□□ 0.51
ZEB2-247ENST00000639389 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
ZEB2-247ENST00000639389 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
ZEB2-247ENST00000639389 CAPN15O75808 1086 aa18.16■□□□□ 0.5
ZEB2-247ENST00000639389 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
ZEB2-247ENST00000639389 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
ZEB2-247ENST00000639389 DSG3P32926 999 aa17.98■□□□□ 0.47
ZEB2-247ENST00000639389 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
ZEB2-247ENST00000639389 ATXN8OSP0DMR3 200 aa17.95■□□□□ 0.46
ZEB2-247ENST00000639389 ABCB7O75027 752 aa17.81■□□□□ 0.44
ZEB2-247ENST00000639389 POLA2Q14181 598 aa17.7■□□□□ 0.42
ZEB2-247ENST00000639389 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
ZEB2-247ENST00000639389 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
ZEB2-247ENST00000639389 FBLN2P98095 1184 aa17.19■□□□□ 0.34
ZEB2-247ENST00000639389 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
ZEB2-247ENST00000639389 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
ZEB2-247ENST00000639389 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
ZEB2-247ENST00000639389 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
ZEB2-247ENST00000639389 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
ZEB2-247ENST00000639389 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
ZEB2-247ENST00000639389 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
ZEB2-247ENST00000639389 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
ZEB2-247ENST00000639389 SSUH2Q9Y2M2 353 aa16.77■□□□□ 0.27
ZEB2-247ENST00000639389 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
ZEB2-247ENST00000639389 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
ZEB2-247ENST00000639389 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
ZEB2-247ENST00000639389 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
ZEB2-247ENST00000639389 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
ZEB2-247ENST00000639389 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
ZEB2-247ENST00000639389 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
ZEB2-247ENST00000639389 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
ZEB2-247ENST00000639389 FKBP8Q14318 412 aa16.39■□□□□ 0.21
ZEB2-247ENST00000639389 PROM2Q8N271 834 aa16.39■□□□□ 0.21
ZEB2-247ENST00000639389 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
ZEB2-247ENST00000639389 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
ZEB2-247ENST00000639389 POTEHQ6S545 545 aa16.29■□□□□ 0.2
ZEB2-247ENST00000639389 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
ZEB2-247ENST00000639389 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
ZEB2-247ENST00000639389 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
ZEB2-247ENST00000639389 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
ZEB2-247ENST00000639389 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
ZEB2-247ENST00000639389 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
ZEB2-247ENST00000639389 NACADO15069 1562 aa16.14■□□□□ 0.17
ZEB2-247ENST00000639389 ABCC9O60706 1549 aa16.11■□□□□ 0.17
ZEB2-247ENST00000639389 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
ZEB2-247ENST00000639389 CHADLQ6NUI6 762 aa16.01■□□□□ 0.15
ZEB2-247ENST00000639389 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
ZEB2-247ENST00000639389 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
ZEB2-247ENST00000639389 FBXO3Q9UK99 471 aa15.89■□□□□ 0.13
ZEB2-247ENST00000639389 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
ZEB2-247ENST00000639389 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
ZEB2-247ENST00000639389 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
ZEB2-247ENST00000639389 MIER1Q8N108 512 aa15.78■□□□□ 0.12
ZEB2-247ENST00000639389 HAX1O00165 279 aa15.77■□□□□ 0.11
ZEB2-247ENST00000639389 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
ZEB2-247ENST00000639389 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
ZEB2-247ENST00000639389 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
ZEB2-247ENST00000639389 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
ZEB2-247ENST00000639389 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
ZEB2-247ENST00000639389 EVX2Q03828 476 aa15.68■□□□□ 0.1
ZEB2-247ENST00000639389 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
ZEB2-247ENST00000639389 CD44P16070 742 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms