RNA–Protein interactions for RNA: ENST00000637330.1

CACNB4-249, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-249ENST00000637330 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
CACNB4-249ENST00000637330 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.28
CACNB4-249ENST00000637330 NISCHQ9Y2I1 1504 aa12.38□□□□□ -0.43
CACNB4-249ENST00000637330 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
CACNB4-249ENST00000637330 MYT1Q01538 1121 aa12.21□□□□□ -0.45
CACNB4-249ENST00000637330 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
CACNB4-249ENST00000637330 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
CACNB4-249ENST00000637330 SENP3Q9H4L4 574 aaPredicted RBP11.42□□□□□ -0.58
CACNB4-249ENST00000637330 HRCP23327 699 aa11.28□□□□□ -0.6
CACNB4-249ENST00000637330 ERICH6Q7L0X2 663 aa11.03□□□□□ -0.64
CACNB4-249ENST00000637330 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
CACNB4-249ENST00000637330 APLP2Q06481 763 aa10.81□□□□□ -0.68
CACNB4-249ENST00000637330 PRKCSHP14314 528 aaPredicted RBP10.79□□□□□ -0.68
CACNB4-249ENST00000637330 FOXD1Q16676 465 aa10.73□□□□□ -0.69
CACNB4-249ENST00000637330 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
CACNB4-249ENST00000637330 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.69
CACNB4-249ENST00000637330 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
CACNB4-249ENST00000637330 ZEB1P37275 1124 aaPredicted RBP10.66□□□□□ -0.7
CACNB4-249ENST00000637330 SLC24A1O60721 1099 aa10.6□□□□□ -0.71
CACNB4-249ENST00000637330 PPARGC1BQ86YN6 1023 aaKnown RBP10.56□□□□□ -0.72
CACNB4-249ENST00000637330 ACIN1Q9UKV3 1341 aaKnown RBP10.56□□□□□ -0.72
CACNB4-249ENST00000637330 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
CACNB4-249ENST00000637330 POTEDQ86YR6 584 aa10.52□□□□□ -0.73
CACNB4-249ENST00000637330 FAM9AQ8IZU1 332 aaPredicted RBP10.46□□□□□ -0.73
CACNB4-249ENST00000637330 PCGF6Q9BYE7 350 aa10.46□□□□□ -0.73
CACNB4-249ENST00000637330 DCAF1Q9Y4B6 1507 aa10.45□□□□□ -0.74
CACNB4-249ENST00000637330 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
CACNB4-249ENST00000637330 ZCCHC6Q5VYS8 1495 aaKnown RBP10.41□□□□□ -0.74
CACNB4-249ENST00000637330 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
CACNB4-249ENST00000637330 ADRA2BP18089 450 aa10.39□□□□□ -0.75
CACNB4-249ENST00000637330 ANP32EQ9BTT0 268 aa10.39□□□□□ -0.75
CACNB4-249ENST00000637330 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
CACNB4-249ENST00000637330 GTF3C3Q9Y5Q9 886 aa10.36□□□□□ -0.75
CACNB4-249ENST00000637330 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
CACNB4-249ENST00000637330 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
CACNB4-249ENST00000637330 CLSPNQ9HAW4 1339 aa10.3□□□□□ -0.76
CACNB4-249ENST00000637330 TRIM26Q12899 539 aaPredicted RBP10.27□□□□□ -0.77
CACNB4-249ENST00000637330 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
CACNB4-249ENST00000637330 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
CACNB4-249ENST00000637330 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.79
CACNB4-249ENST00000637330 EIF5BO60841 1220 aaKnown RBP10.12□□□□□ -0.79
CACNB4-249ENST00000637330 UBE2Q2Q8WVN8 375 aa10.1□□□□□ -0.79
CACNB4-249ENST00000637330 PIAS4Q8N2W9 510 aaPredicted RBP10.08□□□□□ -0.8
CACNB4-249ENST00000637330 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
CACNB4-249ENST00000637330 ERICH6BQ5W0A0 696 aa10.05□□□□□ -0.8
CACNB4-249ENST00000637330 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
CACNB4-249ENST00000637330 ABCC9O60706 1549 aa9.99□□□□□ -0.81
CACNB4-249ENST00000637330 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
CACNB4-249ENST00000637330 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
CACNB4-249ENST00000637330 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
CACNB4-249ENST00000637330 NACADO15069 1562 aa9.84□□□□□ -0.83
CACNB4-249ENST00000637330 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
CACNB4-249ENST00000637330 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
CACNB4-249ENST00000637330 SUPT16HQ9Y5B9 1047 aaKnown RBP9.78□□□□□ -0.84
CACNB4-249ENST00000637330 PKNOX2Q96KN3 472 aa9.76□□□□□ -0.85
CACNB4-249ENST00000637330 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
CACNB4-249ENST00000637330 MSH5O43196 834 aa9.72□□□□□ -0.85
CACNB4-249ENST00000637330 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
CACNB4-249ENST00000637330 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
CACNB4-249ENST00000637330 RB1CC1Q8TDY2 1594 aa9.7□□□□□ -0.86
CACNB4-249ENST00000637330 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
CACNB4-249ENST00000637330 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
CACNB4-249ENST00000637330 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
CACNB4-249ENST00000637330 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
CACNB4-249ENST00000637330 NEFLP07196 543 aa9.66□□□□□ -0.86
CACNB4-249ENST00000637330 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
CACNB4-249ENST00000637330 SALL2Q9Y467 1007 aaPredicted RBP9.63□□□□□ -0.87
CACNB4-249ENST00000637330 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
CACNB4-249ENST00000637330 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
CACNB4-249ENST00000637330 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
CACNB4-249ENST00000637330 YTHDC1Q96MU7 727 aaKnown RBP9.59□□□□□ -0.87
CACNB4-249ENST00000637330 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
CACNB4-249ENST00000637330 RANGAP1P46060 587 aaPredicted RBP9.55□□□□□ -0.88
CACNB4-249ENST00000637330 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
CACNB4-249ENST00000637330 MIER1Q8N108 512 aa9.53□□□□□ -0.88
CACNB4-249ENST00000637330 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.89
CACNB4-249ENST00000637330 BAZ1AQ9NRL2 1556 aaPredicted RBP9.5□□□□□ -0.89
CACNB4-249ENST00000637330 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
CACNB4-249ENST00000637330 WIZO95785 1651 aa9.5□□□□□ -0.89
CACNB4-249ENST00000637330 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
CACNB4-249ENST00000637330 ARXQ96QS3 562 aa9.47□□□□□ -0.89
CACNB4-249ENST00000637330 C11orf95C9JLR9 678 aaPredicted RBP9.46□□□□□ -0.9
CACNB4-249ENST00000637330 MAPK8IP2Q13387 824 aaPredicted RBP9.46□□□□□ -0.9
CACNB4-249ENST00000637330 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
CACNB4-249ENST00000637330 BICRAQ9NZM4 1560 aa9.45□□□□□ -0.9
CACNB4-249ENST00000637330 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
CACNB4-249ENST00000637330 CCDC136Q96JN2 1154 aa9.45□□□□□ -0.9
CACNB4-249ENST00000637330 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
CACNB4-249ENST00000637330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.43□□□□□ -0.9
CACNB4-249ENST00000637330 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
CACNB4-249ENST00000637330 KCNA4P22459 653 aa9.41□□□□□ -0.9
CACNB4-249ENST00000637330 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
CACNB4-249ENST00000637330 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
CACNB4-249ENST00000637330 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
CACNB4-249ENST00000637330 PDE4CQ08493 712 aa9.37□□□□□ -0.91
CACNB4-249ENST00000637330 TOP2AP11388 1531 aaKnown RBP9.37□□□□□ -0.91
CACNB4-249ENST00000637330 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
CACNB4-249ENST00000637330 PDIA4P13667 645 aaKnown RBP9.37□□□□□ -0.91
CACNB4-249ENST00000637330 FGD1P98174 961 aa9.35□□□□□ -0.91
CACNB4-249ENST00000637330 ZMYND15Q9H091 742 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms