RNA–Protein interactions for RNA: ENST00000637301.1

CACNA1D-223, Transcript of calcium voltage-gated channel subunit alpha1 D, human

TSL 5

Gene CACNA1D, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1D-223	ENST00000637301	PELP1	Q8IZL8	1130 aa	Known RBP	6.76	□□□□□ -1.33
CACNA1D-223	ENST00000637301	MYT1	Q01538	1121 aa		6.64	□□□□□ -1.35
CACNA1D-223	ENST00000637301	HRC	P23327	699 aa		6.44	□□□□□ -1.38
CACNA1D-223	ENST00000637301	TTBK1	Q5TCY1	1321 aa	Predicted RBP	6.39	□□□□□ -1.39
CACNA1D-223	ENST00000637301	NISCH	Q9Y2I1	1504 aa		6.31	□□□□□ -1.4
CACNA1D-223	ENST00000637301	SCAF1	Q9H7N4	1312 aa	Known RBP	6.16	□□□□□ -1.42
CACNA1D-223	ENST00000637301	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.07	□□□□□ -1.44
CACNA1D-223	ENST00000637301	ZEB1	P37275	1124 aa	Predicted RBP	6.03	□□□□□ -1.44
CACNA1D-223	ENST00000637301	DCAF1	Q9Y4B6	1507 aa		6.02	□□□□□ -1.45
CACNA1D-223	ENST00000637301	ACIN1	Q9UKV3	1341 aa	Known RBP	5.99	□□□□□ -1.45
CACNA1D-223	ENST00000637301	PCGF6	Q9BYE7	350 aa		5.98	□□□□□ -1.45
CACNA1D-223	ENST00000637301	MYO15B	Q96JP2	1530 aa		5.94	□□□□□ -1.46
CACNA1D-223	ENST00000637301	PRKCSH	P14314	528 aa	Predicted RBP	5.94	□□□□□ -1.46
CACNA1D-223	ENST00000637301	BCL11A	Q9H165	835 aa		5.94	□□□□□ -1.46
CACNA1D-223	ENST00000637301	CCDC180	Q9P1Z9	1646 aa		5.94	□□□□□ -1.46
CACNA1D-223	ENST00000637301	APLP2	Q06481	763 aa		5.93	□□□□□ -1.46
CACNA1D-223	ENST00000637301	ERICH6	Q7L0X2	663 aa		5.93	□□□□□ -1.46
CACNA1D-223	ENST00000637301	CENPB	P07199	599 aa	Predicted RBP	5.92	□□□□□ -1.46
CACNA1D-223	ENST00000637301	TRIM26	Q12899	539 aa	Predicted RBP	5.88	□□□□□ -1.47
CACNA1D-223	ENST00000637301	NEUROD1	Q13562	356 aa		5.88	□□□□□ -1.47
CACNA1D-223	ENST00000637301	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.87	□□□□□ -1.47
CACNA1D-223	ENST00000637301	GTF3C3	Q9Y5Q9	886 aa		5.85	□□□□□ -1.47
CACNA1D-223	ENST00000637301	CHIC1	Q5VXU3	224 aa		5.83	□□□□□ -1.48
CACNA1D-223	ENST00000637301	ANP32E	Q9BTT0	268 aa		5.81	□□□□□ -1.48
CACNA1D-223	ENST00000637301	CLSPN	Q9HAW4	1339 aa		5.77	□□□□□ -1.49
CACNA1D-223	ENST00000637301	CSRNP3	Q8WYN3	585 aa		5.68	□□□□□ -1.5
CACNA1D-223	ENST00000637301	TRIM41	Q8WV44	630 aa		5.67	□□□□□ -1.5
CACNA1D-223	ENST00000637301	DIEXF	Q68CQ4	756 aa	Known RBP	5.66	□□□□□ -1.5
CACNA1D-223	ENST00000637301	TSHZ2	Q9NRE2	1034 aa		5.64	□□□□□ -1.51
CACNA1D-223	ENST00000637301	MYT1L	Q9UL68	1186 aa		5.63	□□□□□ -1.51
CACNA1D-223	ENST00000637301	SUPT5H	O00267	1087 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1D-223	ENST00000637301	SLC24A1	O60721	1099 aa		5.6	□□□□□ -1.51
CACNA1D-223	ENST00000637301	LOC105371045	A0A1W2PR82	267 aa		5.57	□□□□□ -1.52
CACNA1D-223	ENST00000637301	ERICH6B	Q5W0A0	696 aa		5.57	□□□□□ -1.52
CACNA1D-223	ENST00000637301	UBE2Q2	Q8WVN8	375 aa		5.57	□□□□□ -1.52
CACNA1D-223	ENST00000637301	ZNF316	A6NFI3	1004 aa	Predicted RBP	5.56	□□□□□ -1.52
CACNA1D-223	ENST00000637301	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.56	□□□□□ -1.52
CACNA1D-223	ENST00000637301	DAXX	Q9UER7	740 aa	Predicted RBP	5.54	□□□□□ -1.52
CACNA1D-223	ENST00000637301	FANCI	Q9NVI1	1328 aa		5.48	□□□□□ -1.53
CACNA1D-223	ENST00000637301	SHROOM4	Q9ULL8	1493 aa		5.48	□□□□□ -1.53
CACNA1D-223	ENST00000637301	MIER1	Q8N108	512 aa		5.48	□□□□□ -1.53
CACNA1D-223	ENST00000637301	ANO8	Q9HCE9	1232 aa	Predicted RBP	5.48	□□□□□ -1.53
CACNA1D-223	ENST00000637301	CCER1	Q8TC90	406 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1D-223	ENST00000637301	EIF5B	O60841	1220 aa	Known RBP	5.46	□□□□□ -1.54
CACNA1D-223	ENST00000637301	RBM19	Q9Y4C8	960 aa	Known RBP	5.46	□□□□□ -1.54
CACNA1D-223	ENST00000637301	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.45	□□□□□ -1.54
CACNA1D-223	ENST00000637301	MSH5	O43196	834 aa		5.44	□□□□□ -1.54
CACNA1D-223	ENST00000637301	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	5.43	□□□□□ -1.54
CACNA1D-223	ENST00000637301	WRN	Q14191	1432 aa	Predicted RBP eCLIP	5.41	□□□□□ -1.54
CACNA1D-223	ENST00000637301	DEK	P35659	375 aa	Known RBP	5.4	□□□□□ -1.54
CACNA1D-223	ENST00000637301	YTHDC1	Q96MU7	727 aa	Known RBP	5.4	□□□□□ -1.54
CACNA1D-223	ENST00000637301	SALL2	Q9Y467	1007 aa	Predicted RBP	5.39	□□□□□ -1.55
CACNA1D-223	ENST00000637301	C11orf95	C9JLR9	678 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNA1D-223	ENST00000637301	PKNOX2	Q96KN3	472 aa		5.35	□□□□□ -1.55
CACNA1D-223	ENST00000637301	WASHC2A	Q641Q2	1341 aa		5.29	□□□□□ -1.56
CACNA1D-223	ENST00000637301	WASHC2C	Q9Y4E1	1318 aa		5.29	□□□□□ -1.56
CACNA1D-223	ENST00000637301	FKBP8	Q14318	412 aa		5.28	□□□□□ -1.56
CACNA1D-223	ENST00000637301	PODXL2	Q9NZ53	605 aa		5.27	□□□□□ -1.57
CACNA1D-223	ENST00000637301	NEFL	P07196	543 aa		5.26	□□□□□ -1.57
CACNA1D-223	ENST00000637301	CCDC136	Q96JN2	1154 aa		5.26	□□□□□ -1.57
CACNA1D-223	ENST00000637301	RSPH6A	Q9H0K4	717 aa		5.25	□□□□□ -1.57
CACNA1D-223	ENST00000637301	USP35	Q9P2H5	1018 aa		5.25	□□□□□ -1.57
CACNA1D-223	ENST00000637301	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1D-223	ENST00000637301	IL27	Q8NEV9	243 aa		5.24	□□□□□ -1.57
CACNA1D-223	ENST00000637301	NOP58	Q9Y2X3	529 aa	Known RBP	5.24	□□□□□ -1.57
CACNA1D-223	ENST00000637301	CCER2	I3L3R5	266 aa		5.23	□□□□□ -1.57
CACNA1D-223	ENST00000637301	PLEKHG5	O94827	1062 aa		5.23	□□□□□ -1.57
CACNA1D-223	ENST00000637301	GLIPR1L2	Q4G1C9	344 aa		5.23	□□□□□ -1.57
CACNA1D-223	ENST00000637301	BCAN	Q96GW7	911 aa		5.21	□□□□□ -1.58
CACNA1D-223	ENST00000637301	TNIK	Q9UKE5	1360 aa		5.2	□□□□□ -1.58
CACNA1D-223	ENST00000637301	ABCC9	O60706	1549 aa		5.19	□□□□□ -1.58
CACNA1D-223	ENST00000637301	RTL5	Q5HYW3	569 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1D-223	ENST00000637301	ZMYND15	Q9H091	742 aa		5.19	□□□□□ -1.58
CACNA1D-223	ENST00000637301	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA1D-223	ENST00000637301	RB1CC1	Q8TDY2	1594 aa		5.18	□□□□□ -1.58
CACNA1D-223	ENST00000637301	IPO9	Q96P70	1041 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1D-223	ENST00000637301	PPP4R2	Q9NY27	417 aa		5.18	□□□□□ -1.58
CACNA1D-223	ENST00000637301	EEA1	Q15075	1411 aa		5.17	□□□□□ -1.58
CACNA1D-223	ENST00000637301	PAK3	O75914	559 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1D-223	ENST00000637301	FAM43A	Q8N2R8	423 aa		5.17	□□□□□ -1.58
CACNA1D-223	ENST00000637301	DHX57	Q6P158	1386 aa	Known RBP	5.16	□□□□□ -1.58
CACNA1D-223	ENST00000637301	CEP162	Q5TB80	1403 aa		5.16	□□□□□ -1.58
CACNA1D-223	ENST00000637301	RSF1	Q96T23	1441 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNA1D-223	ENST00000637301	ITGAE	P38570	1179 aa		5.16	□□□□□ -1.58
CACNA1D-223	ENST00000637301	CUX2	O14529	1486 aa		5.15	□□□□□ -1.58
CACNA1D-223	ENST00000637301	NCAPD3	P42695	1498 aa		5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	RRP9	O43818	475 aa	Known RBP	5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	PPP1R15A	O75807	674 aa	Predicted RBP	5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	FGD1	P98174	961 aa		5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	KCNH8	Q96L42	1107 aa		5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.14	□□□□□ -1.59
CACNA1D-223	ENST00000637301	PPM1G	O15355	546 aa	Predicted RBP	5.13	□□□□□ -1.59
CACNA1D-223	ENST00000637301	AAMP	Q13685	434 aa		5.13	□□□□□ -1.59
CACNA1D-223	ENST00000637301	NBR1	Q14596	966 aa		5.12	□□□□□ -1.59
CACNA1D-223	ENST00000637301	ZBTB47	Q9UFB7	747 aa	Predicted RBP	5.12	□□□□□ -1.59
CACNA1D-223	ENST00000637301	ANP32A	P39687	249 aa	Known RBP	5.11	□□□□□ -1.59
CACNA1D-223	ENST00000637301	VSIG10	Q8N0Z9	540 aa		5.11	□□□□□ -1.59
CACNA1D-223	ENST00000637301	RTN4	Q9NQC3	1192 aa	Known RBP	5.11	□□□□□ -1.59
CACNA1D-223	ENST00000637301	TIMELESS	Q9UNS1	1208 aa		5.11	□□□□□ -1.59
CACNA1D-223	ENST00000637301	GSE1	Q14687	1217 aa		5.1	□□□□□ -1.59

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