RNA–Protein interactions for RNA: ENST00000636858.1

KCNQ2-231, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-231	ENST00000636858	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.53	■□□□□ 0.56
KCNQ2-231	ENST00000636858	CHIC1	Q5VXU3	224 aa		17.3	■□□□□ 0.36
KCNQ2-231	ENST00000636858	SENP3	Q9H4L4	574 aa	Predicted RBP	15.89	■□□□□ 0.13
KCNQ2-231	ENST00000636858	PHF23	Q9BUL5	403 aa	Predicted RBP	15.63	■□□□□ 0.09
KCNQ2-231	ENST00000636858	POTED	Q86YR6	584 aa		15.01	□□□□□ -0.01
KCNQ2-231	ENST00000636858	FOXD1	Q16676	465 aa		14.92	□□□□□ -0.02
KCNQ2-231	ENST00000636858	MSH5	O43196	834 aa		14.18	□□□□□ -0.14
KCNQ2-231	ENST00000636858	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.85	□□□□□ -0.19
KCNQ2-231	ENST00000636858	PPP6R1	Q9UPN7	881 aa		13.46	□□□□□ -0.25
KCNQ2-231	ENST00000636858	ADRA2B	P18089	450 aa		13.43	□□□□□ -0.26
KCNQ2-231	ENST00000636858	PLPPR3	Q6T4P5	718 aa		13.24	□□□□□ -0.29
KCNQ2-231	ENST00000636858	CACNB1	Q02641	598 aa	Predicted RBP	12.68	□□□□□ -0.38
KCNQ2-231	ENST00000636858	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.54	□□□□□ -0.4
KCNQ2-231	ENST00000636858	DMRT2	Q9Y5R5	561 aa		12.48	□□□□□ -0.41
KCNQ2-231	ENST00000636858	DCAF8L1	A6NGE4	600 aa		12.23	□□□□□ -0.45
KCNQ2-231	ENST00000636858	SCAF1	Q9H7N4	1312 aa	Known RBP	12.21	□□□□□ -0.45
KCNQ2-231	ENST00000636858	RNF39	Q9H2S5	420 aa		12.03	□□□□□ -0.48
KCNQ2-231	ENST00000636858	C1QBP	Q07021	282 aa	Known RBP	11.8	□□□□□ -0.52
KCNQ2-231	ENST00000636858	NISCH	Q9Y2I1	1504 aa		11.72	□□□□□ -0.53
KCNQ2-231	ENST00000636858	HOXD11	P31277	338 aa	Predicted RBP	11.72	□□□□□ -0.53
KCNQ2-231	ENST00000636858	POTEH	Q6S545	545 aa		11.65	□□□□□ -0.54
KCNQ2-231	ENST00000636858	PPP4R3CP	Q6ZMV5	832 aa		11.55	□□□□□ -0.56
KCNQ2-231	ENST00000636858	RNF216	Q9NWF9	866 aa	Predicted RBP	11.48	□□□□□ -0.57
KCNQ2-231	ENST00000636858	CNKSR2	Q8WXI2	1034 aa		11.45	□□□□□ -0.58
KCNQ2-231	ENST00000636858	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
KCNQ2-231	ENST00000636858	DNAJC5B	Q9UF47	199 aa		11.32	□□□□□ -0.6
KCNQ2-231	ENST00000636858	CAPN15	O75808	1086 aa		11.1	□□□□□ -0.63
KCNQ2-231	ENST00000636858	DSG3	P32926	999 aa		11.07	□□□□□ -0.64
KCNQ2-231	ENST00000636858	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.04	□□□□□ -0.64
KCNQ2-231	ENST00000636858		U3KPZ7	1027 aa	Predicted RBP	10.94	□□□□□ -0.66
KCNQ2-231	ENST00000636858	NCBP3	Q53F19	620 aa	Known RBP	10.9	□□□□□ -0.66
KCNQ2-231	ENST00000636858	ABCB7	O75027	752 aa		10.81	□□□□□ -0.68
KCNQ2-231	ENST00000636858	TRH	P20396	242 aa	Predicted RBP	10.78	□□□□□ -0.68
KCNQ2-231	ENST00000636858	NPM3	O75607	178 aa	Known RBP	10.75	□□□□□ -0.69
KCNQ2-231	ENST00000636858	CHRDL2	Q6WN34	429 aa		10.65	□□□□□ -0.7
KCNQ2-231	ENST00000636858	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.61	□□□□□ -0.71
KCNQ2-231	ENST00000636858	SP7	Q8TDD2	431 aa	Predicted RBP	10.59	□□□□□ -0.71
KCNQ2-231	ENST00000636858	RBM42	Q9BTD8	480 aa	Known RBP	10.57	□□□□□ -0.72
KCNQ2-231	ENST00000636858	APLP2	Q06481	763 aa		10.54	□□□□□ -0.72
KCNQ2-231	ENST00000636858	SLC4A2	P04920	1241 aa		10.41	□□□□□ -0.74
KCNQ2-231	ENST00000636858	CCDC180	Q9P1Z9	1646 aa		10.38	□□□□□ -0.75
KCNQ2-231	ENST00000636858	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.36	□□□□□ -0.75
KCNQ2-231	ENST00000636858	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.36	□□□□□ -0.75
KCNQ2-231	ENST00000636858	HAX1	O00165	279 aa		10.32	□□□□□ -0.76
KCNQ2-231	ENST00000636858	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.29	□□□□□ -0.76
KCNQ2-231	ENST00000636858	POLA2	Q14181	598 aa		10.27	□□□□□ -0.77
KCNQ2-231	ENST00000636858	PIP4P2	Q8N4L2	257 aa		10.25	□□□□□ -0.77
KCNQ2-231	ENST00000636858	AKT1S1	Q96B36	256 aa		10.18	□□□□□ -0.78
KCNQ2-231	ENST00000636858	REM2	Q8IYK8	340 aa	Predicted RBP	10.13	□□□□□ -0.79
KCNQ2-231	ENST00000636858	EVX2	Q03828	476 aa		10.09	□□□□□ -0.79
KCNQ2-231	ENST00000636858	PITPNM1	O00562	1244 aa		10.05	□□□□□ -0.8
KCNQ2-231	ENST00000636858	FXR2	P51116	673 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
KCNQ2-231	ENST00000636858	PLSCR2	Q9NRY7	297 aa		10.02	□□□□□ -0.81
KCNQ2-231	ENST00000636858	KCNA4	P22459	653 aa		10	□□□□□ -0.81
KCNQ2-231	ENST00000636858	OSCAR	Q8IYS5	282 aa		9.99	□□□□□ -0.81
KCNQ2-231	ENST00000636858	LHX8	Q68G74	356 aa		9.95	□□□□□ -0.82
KCNQ2-231	ENST00000636858	MYCN	P04198	464 aa	Predicted RBP	9.94	□□□□□ -0.82
KCNQ2-231	ENST00000636858	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.93	□□□□□ -0.82
KCNQ2-231	ENST00000636858	ZCCHC6	Q5VYS8	1495 aa	Known RBP	9.88	□□□□□ -0.83
KCNQ2-231	ENST00000636858	ATF5	Q9Y2D1	282 aa	Predicted RBP	9.82	□□□□□ -0.84
KCNQ2-231	ENST00000636858	PRKAR2A	P13861	404 aa	Known RBP	9.81	□□□□□ -0.84
KCNQ2-231	ENST00000636858	GABBR2	O75899	941 aa		9.8	□□□□□ -0.84
KCNQ2-231	ENST00000636858	CLEC11A	Q9Y240	323 aa		9.75	□□□□□ -0.85
KCNQ2-231	ENST00000636858	C19orf67	A6NJJ6	358 aa		9.73	□□□□□ -0.85
KCNQ2-231	ENST00000636858	DCAF1	Q9Y4B6	1507 aa		9.71	□□□□□ -0.86
KCNQ2-231	ENST00000636858	ABCC9	O60706	1549 aa		9.66	□□□□□ -0.86
KCNQ2-231	ENST00000636858	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.61	□□□□□ -0.87
KCNQ2-231	ENST00000636858	CHADL	Q6NUI6	762 aa		9.6	□□□□□ -0.87
KCNQ2-231	ENST00000636858	SPDYE2B	A6NHP3	402 aa		9.58	□□□□□ -0.88
KCNQ2-231	ENST00000636858	SPDYE6	P0CI01	402 aa		9.58	□□□□□ -0.88
KCNQ2-231	ENST00000636858	SPDYE2	Q495Y8	402 aa		9.58	□□□□□ -0.88
KCNQ2-231	ENST00000636858	MYO15B	Q96JP2	1530 aa		9.57	□□□□□ -0.88
KCNQ2-231	ENST00000636858	POTEI	P0CG38	1075 aa		9.57	□□□□□ -0.88
KCNQ2-231	ENST00000636858	NACAD	O15069	1562 aa		9.54	□□□□□ -0.88
KCNQ2-231	ENST00000636858	SHROOM4	Q9ULL8	1493 aa		9.53	□□□□□ -0.88
KCNQ2-231	ENST00000636858	DCAF8L2	P0C7V8	631 aa		9.52	□□□□□ -0.89
KCNQ2-231	ENST00000636858	RB1CC1	Q8TDY2	1594 aa		9.5	□□□□□ -0.89
KCNQ2-231	ENST00000636858	SCRIB	Q14160	1630 aa		9.49	□□□□□ -0.89
KCNQ2-231	ENST00000636858	UNC13A	Q9UPW8	1703 aa		9.49	□□□□□ -0.89
KCNQ2-231	ENST00000636858	FOXD4L1	Q9NU39	408 aa		9.49	□□□□□ -0.89
KCNQ2-231	ENST00000636858	FBLN2	P98095	1184 aa		9.48	□□□□□ -0.89
KCNQ2-231	ENST00000636858	CD44	P16070	742 aa	Known RBP	9.46	□□□□□ -0.9
KCNQ2-231	ENST00000636858	DCBLD2	Q96PD2	775 aa		9.46	□□□□□ -0.9
KCNQ2-231	ENST00000636858	ZNF692	Q9BU19	519 aa	Predicted RBP	9.44	□□□□□ -0.9
KCNQ2-231	ENST00000636858	POTEM	A6NI47	508 aa		9.43	□□□□□ -0.9
KCNQ2-231	ENST00000636858	PRR29	P0C7W0	189 aa		9.42	□□□□□ -0.9
KCNQ2-231	ENST00000636858	POTEG	Q6S5H5	508 aa		9.38	□□□□□ -0.91
KCNQ2-231	ENST00000636858	OTUD5	Q96G74	571 aa		9.35	□□□□□ -0.91
KCNQ2-231	ENST00000636858	SSUH2	Q9Y2M2	353 aa		9.34	□□□□□ -0.91
KCNQ2-231	ENST00000636858	SLC4A1AP	Q9BWU0	796 aa	Known RBP	9.31	□□□□□ -0.92
KCNQ2-231	ENST00000636858	FARP1	Q9Y4F1	1045 aa	Predicted RBP	9.31	□□□□□ -0.92
KCNQ2-231	ENST00000636858	MKRN4P	Q13434	485 aa	Predicted RBP	9.29	□□□□□ -0.92
KCNQ2-231	ENST00000636858	CLCN6	P51797	869 aa		9.28	□□□□□ -0.92
KCNQ2-231	ENST00000636858	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
KCNQ2-231	ENST00000636858	POTEB2	H3BUK9	544 aa		9.26	□□□□□ -0.93
KCNQ2-231	ENST00000636858	ZRANB1	Q9UGI0	708 aa		9.25	□□□□□ -0.93
KCNQ2-231	ENST00000636858	BICRA	Q9NZM4	1560 aa		9.21	□□□□□ -0.93
KCNQ2-231	ENST00000636858	GALR2	O43603	387 aa	Predicted RBP	9.21	□□□□□ -0.94
KCNQ2-231	ENST00000636858	ZNF579	Q8NAF0	562 aa	Known RBP	9.2	□□□□□ -0.94
KCNQ2-231	ENST00000636858	ATXN8OS	P0DMR3	200 aa		9.18	□□□□□ -0.94

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